RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 GBAP04062 536 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 IGFBP1P08833 259 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 POU2F2P09086 479 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 GIMD1P0DJR0 217 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 AKT2P31751 481 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 GSK3AP49840 483 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 HMGA2P52926 109 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 OR10A3P58181 314 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 ZNF616Q08AN1 781 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 SLC14A1Q13336 389 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 GGNBP1Q5YKI7 109 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 FAM71E1Q6IPT2 247 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 CLEC2AQ6UVW9 174 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 LCTLQ6UWM7 567 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 SPRED2Q7Z698 418 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 ZNF321PQ8N8H1 164 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 FAM98AQ8NCA5 519 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 SOSTQ9BQB4 213 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 EPHX3Q9H6B9 360 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 OR5H15A6NDH6 313 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 OR5H1A6NKK0 313 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 OR6C76A6NM76 312 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 MAGEB4O15481 346 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 LINC01565O15544 149 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 SEMG1P04279 462 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 HOXC4P09017 264 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 CCR4P51679 360 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 ENPP2Q13822 863 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 EIPR1Q53HC9 387 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 RABEPKQ7Z6M1 372 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 AMZ2Q86W34 360 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 ACBD7Q8N6N7 88 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 OR4K5Q8NGD3 323 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 ADAMTS15Q8TE58 950 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 DNAJB11Q9UBS4 358 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 OR51B4Q9Y5P0 310 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 PUS1Q9Y606 427 aaKnown RBP eCLIP13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 C7orf77A4D0Y5 90 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 DIRAS3O95661 229 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 ZNF10P21506 573 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 TAS2R43P59537 309 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 OR7A5Q15622 319 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 MAPK14Q16539 360 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 GID4Q8IVV7 300 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 BAP18Q8IXM2 172 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 OR1J1Q8NGS3 322 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 CASTOR1Q8WTX7 329 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 FOXRED1Q96CU9 486 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 AK6Q9Y3D8 172 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 WIF1Q9Y5W5 379 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 DCTN6O00399 190 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 SNRPCP09234 159 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 CSNK2A2P19784 350 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 IMPA1P29218 277 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 HOXA6P31267 233 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 RPL29P47914 159 aaKnown RBP13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 TCEA2Q15560 299 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 AWAT1Q58HT5 328 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 SLC22A25Q6T423 547 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 TMPRSS11FQ6ZWK6 438 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 OR4C15Q8NGM1 316 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 OR6X1Q8NH79 312 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 PACRGQ96M98 296 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 UBL7Q96S82 380 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 SLC25A19Q9HC21 320 aa13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 TMEM184BQ9Y519 407 aaPredicted RBP13.25□□□□□ -0.29
SYNGAP1-203ENST00000428982 ZNF705FA8MVS1 300 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 ANHXE9PGG2 379 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 SULT2B1O00204 365 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 GAPDHSO14556 408 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 OR1F1O43749 312 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 B3GALT4O96024 378 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 ZNF705DP0CH99 300 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 ZNF705BP0CI00 300 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 BTCP35070 178 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 TRA2BP62995 288 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 SLC36A2Q495M3 483 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 AARDQ4LEZ3 155 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 PARM1Q6UWI2 310 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 ETFBKMTQ8IXQ9 262 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 RNF175Q8N4F7 328 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 NEURL3Q96EH8 262 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 MYADMQ96S97 322 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 NDUFAF3Q9BU61 184 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 TAS2R8Q9NYW2 309 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 FTSJ1Q9UET6 329 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 SLC35A3Q9Y2D2 325 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 M0QZK8 103 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 ZNF208O43345 1280 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 GGCTO75223 188 aaKnown RBP13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 ZNF821O75541 412 aaPredicted RBP13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 ARL4DP49703 201 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 NCBP2P52298 156 aaKnown RBP eCLIP13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 ACTA2P62736 377 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 ACTG2P63267 376 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 ACTC1P68032 377 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 ACTA1P68133 377 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 RPE65Q16518 533 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 RAB8BQ92930 207 aa13.24□□□□□ -0.29
SYNGAP1-203ENST00000428982 SYT4Q9H2B2 425 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms