RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 SRSF2Q01130 221 aaKnown RBP14.73□□□□□ -0.05
TRIM39-209ENST00000428728 ZNF74Q16587 644 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 TTC33Q6PID6 262 aaPredicted RBP14.73□□□□□ -0.05
TRIM39-209ENST00000428728 LINC00114Q6XXX2 140 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 SLC35D2Q76EJ3 337 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 ZNF627Q7L945 461 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 TSPYL5Q86VY4 417 aaPredicted RBP14.73□□□□□ -0.05
TRIM39-209ENST00000428728 OR10A6Q8NH74 314 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 SLC26A7Q8TE54 656 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 UBASH3BQ8TF42 649 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 MRPL24Q96A35 216 aaKnown RBP14.73□□□□□ -0.05
TRIM39-209ENST00000428728 TAMM41Q96BW9 452 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 ZNF75AQ96N20 296 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 SNX18Q96RF0 628 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 SYT3Q9BQG1 590 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 KAT8Q9H7Z6 458 aaKnown RBP14.73□□□□□ -0.05
TRIM39-209ENST00000428728 NANSQ9NR45 359 aa14.73□□□□□ -0.05
TRIM39-209ENST00000428728 A0A0G2JND7 137 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 TRAPPC13A5PLN9 417 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 M0R233 179 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 UBL3O95164 117 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 LYPD3O95274 346 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 C8BP07358 591 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 PATE4P0C8F1 98 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 UMPSP11172 480 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 GIFP27352 417 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 APEX1P27695 318 aaKnown RBP14.72□□□□□ -0.05
TRIM39-209ENST00000428728 IL2RGP31785 369 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 RAB1AP62820 205 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 GALK2Q01415 458 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 RAB39AQ14964 217 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 GKAP1Q5VSY0 366 aaPredicted RBP14.72□□□□□ -0.05
TRIM39-209ENST00000428728 PATL1Q86TB9 770 aaKnown RBP14.72□□□□□ -0.05
TRIM39-209ENST00000428728 SLC30A8Q8IWU4 369 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 LRRC17Q8N6Y2 441 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 STON2Q8WXE9 905 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 FZR1Q9UM11 496 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 SPEF1Q9Y4P9 236 aa14.72□□□□□ -0.05
TRIM39-209ENST00000428728 SYNGR3O43761 229 aa14.71□□□□□ -0.05
TRIM39-209ENST00000428728 EDF1O60869 148 aaKnown RBP14.71□□□□□ -0.05
TRIM39-209ENST00000428728 ZNF35P13682 527 aa14.71□□□□□ -0.05
TRIM39-209ENST00000428728 CHN2P52757 468 aa14.71□□□□□ -0.05
TRIM39-209ENST00000428728 MAD2L1BPQ15013 274 aaPredicted RBP14.71□□□□□ -0.05
TRIM39-209ENST00000428728 TRIP10Q15642 601 aa14.71□□□□□ -0.05
TRIM39-209ENST00000428728 CR1LQ2VPA4 569 aa14.71□□□□□ -0.05
TRIM39-209ENST00000428728 KRTAP24-1Q3LI83 254 aa14.71□□□□□ -0.05
TRIM39-209ENST00000428728 INTS11Q5TA45 600 aaKnown RBP14.71□□□□□ -0.05
TRIM39-209ENST00000428728 NANOGNBQ7Z5D8 188 aa14.71□□□□□ -0.05
TRIM39-209ENST00000428728 SKA3Q8IX90 412 aa14.71□□□□□ -0.05
TRIM39-209ENST00000428728 ZNF786Q8N393 782 aa14.71□□□□□ -0.05
TRIM39-209ENST00000428728 OR6X1Q8NH79 312 aa14.71□□□□□ -0.05
TRIM39-209ENST00000428728 FGFBP3Q8TAT2 258 aa14.71□□□□□ -0.05
TRIM39-209ENST00000428728 TMEM54Q969K7 222 aa14.71□□□□□ -0.05
TRIM39-209ENST00000428728 ZNF566Q969W8 418 aa14.71□□□□□ -0.05
TRIM39-209ENST00000428728 TAS2R5Q9NYW4 299 aa14.71□□□□□ -0.05
TRIM39-209ENST00000428728 GLTPQ9NZD2 209 aa14.71□□□□□ -0.05
TRIM39-209ENST00000428728 FBN3Q75N90 2809 aa14.7□□□□□ -0.06
TRIM39-209ENST00000428728 LILRA1O75019 489 aa14.7□□□□□ -0.06
TRIM39-209ENST00000428728 HIST1H2ABP04908 130 aa14.7□□□□□ -0.06
TRIM39-209ENST00000428728 TACSTD2P09758 323 aa14.7□□□□□ -0.06
TRIM39-209ENST00000428728 TCN1P20061 433 aaPredicted RBP14.7□□□□□ -0.06
TRIM39-209ENST00000428728 ALDH3B1P43353 468 aa14.7□□□□□ -0.06
TRIM39-209ENST00000428728 RPS23P62266 143 aaKnown RBP14.7□□□□□ -0.06
TRIM39-209ENST00000428728 CCNIQ14094 377 aa14.7□□□□□ -0.06
TRIM39-209ENST00000428728 VMACQ2NL98 169 aa14.7□□□□□ -0.06
TRIM39-209ENST00000428728 HIST3H2AQ7L7L0 130 aa14.7□□□□□ -0.06
TRIM39-209ENST00000428728 LRP11Q86VZ4 500 aa14.7□□□□□ -0.06
TRIM39-209ENST00000428728 HIST1H2ACQ93077 130 aa14.7□□□□□ -0.06
TRIM39-209ENST00000428728 MYEF2Q9P2K5 600 aaKnown RBP14.7□□□□□ -0.06
TRIM39-209ENST00000428728 REV1Q9UBZ9 1251 aa14.7□□□□□ -0.06
TRIM39-209ENST00000428728 ZNF229Q9UJW7 825 aa14.7□□□□□ -0.06
TRIM39-209ENST00000428728 FBP2O00757 339 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 PGA4P0DJD7 388 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 PGA3P0DJD8 388 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 TNFRSF1BP20333 461 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 LSP1P33241 339 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 GLRXP35754 106 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 CRYBA2P53672 197 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 ZP4Q12836 540 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 RIN1Q13671 783 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 RABL3Q5HYI8 236 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 PIWIL3Q7Z3Z3 882 aaKnown RBP14.69□□□□□ -0.06
TRIM39-209ENST00000428728 CARM1Q86X55 608 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 ZNF584Q8IVC4 421 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 SLC22A24Q8N4F4 322 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 TSPEARQ8WU66 669 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 SLC25A44Q96H78 314 aaPredicted RBP14.69□□□□□ -0.06
TRIM39-209ENST00000428728 MPP4Q96JB8 637 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 SH3GL3Q99963 347 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 ZNF426Q9BUY5 554 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 TMEM120AQ9BXJ8 343 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 PCDHAC1Q9H158 963 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 OR51B6Q9H340 312 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 DENND2DQ9H6A0 471 aaPredicted RBP14.69□□□□□ -0.06
TRIM39-209ENST00000428728 TMEM38BQ9NVV0 291 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 SLC7A8Q9UHI5 535 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 FBXL3Q9UKT7 428 aa14.69□□□□□ -0.06
TRIM39-209ENST00000428728 STAB1Q9NY15 2570 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 A0A1W2PPW3 197 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 MCIDASD6RGH6 385 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms