RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 SLC13A4Q9UKG4 626 aa13.36□□□□□ -0.27
SEC13-210ENST00000428626 POFUT2Q9Y2G5 429 aa13.36□□□□□ -0.27
SEC13-210ENST00000428626 NBEAL1Q6ZS30 2694 aa13.36□□□□□ -0.27
SEC13-210ENST00000428626 ZNF726A6NNF4 738 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 CH25HO95992 272 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 MT-ATP6P00846 226 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 TCN1P20061 433 aaPredicted RBP13.35□□□□□ -0.27
SEC13-210ENST00000428626 THBS2P35442 1172 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 CSNK1A1P48729 337 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 SEC24CP53992 1094 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 RAB1AP62820 205 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 RBBP4Q09028 425 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 MELKQ14680 651 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 RAB39AQ14964 217 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 MAD2L1BPQ15013 274 aaPredicted RBP13.35□□□□□ -0.27
SEC13-210ENST00000428626 FXNQ16595 210 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 CYP51A1Q16850 503 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 CR1LQ2VPA4 569 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 ELFN2Q5R3F8 820 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 LRFN4Q6PJG9 635 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 SLC35D2Q76EJ3 337 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 ADAMTS16Q8TE57 1224 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 UBASH3BQ8TF42 649 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 SYT3Q9BQG1 590 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 PRSS27Q9BQR3 290 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 ZNF426Q9BUY5 554 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 FZR1Q9UM11 496 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 NDUFAF1Q9Y375 327 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 CMAHPQ9Y471 501 aa13.35□□□□□ -0.27
SEC13-210ENST00000428626 KPNA4O00629 521 aaPredicted RBP13.34□□□□□ -0.27
SEC13-210ENST00000428626 FBP2O00757 339 aa13.34□□□□□ -0.27
SEC13-210ENST00000428626 HPXP02790 462 aa13.34□□□□□ -0.27
SEC13-210ENST00000428626 C8BP07358 591 aa13.34□□□□□ -0.27
SEC13-210ENST00000428626 GLRXP35754 106 aa13.34□□□□□ -0.27
SEC13-210ENST00000428626 ALDH3B1P43353 468 aa13.34□□□□□ -0.27
SEC13-210ENST00000428626 ZP4Q12836 540 aa13.34□□□□□ -0.27
SEC13-210ENST00000428626 PAQR4Q8N4S7 273 aaPredicted RBP13.34□□□□□ -0.27
SEC13-210ENST00000428626 ZNF540Q8NDQ6 660 aa13.34□□□□□ -0.27
SEC13-210ENST00000428626 OR10A6Q8NH74 314 aa13.34□□□□□ -0.27
SEC13-210ENST00000428626 OR6X1Q8NH79 312 aa13.34□□□□□ -0.27
SEC13-210ENST00000428626 STON2Q8WXE9 905 aa13.34□□□□□ -0.27
SEC13-210ENST00000428626 EVA1AQ9H8M9 152 aa13.34□□□□□ -0.27
SEC13-210ENST00000428626 B3GAT2Q9NPZ5 323 aa13.34□□□□□ -0.27
SEC13-210ENST00000428626 MEPEQ9NQ76 525 aaPredicted RBP13.34□□□□□ -0.27
SEC13-210ENST00000428626 GLTPQ9NZD2 209 aa13.34□□□□□ -0.27
SEC13-210ENST00000428626 SLC7A7Q9UM01 511 aa13.34□□□□□ -0.27
SEC13-210ENST00000428626 WNT9BO14905 357 aa13.33□□□□□ -0.28
SEC13-210ENST00000428626 SYNGR3O43761 229 aa13.33□□□□□ -0.28
SEC13-210ENST00000428626 ASAH2BP0C7U1 165 aa13.33□□□□□ -0.28
SEC13-210ENST00000428626 COL8A2P25067 703 aa13.33□□□□□ -0.28
SEC13-210ENST00000428626 APEX1P27695 318 aaKnown RBP13.33□□□□□ -0.28
SEC13-210ENST00000428626 PCGF2P35227 344 aa13.33□□□□□ -0.28
SEC13-210ENST00000428626 RUNX1T1Q06455 604 aa13.33□□□□□ -0.28
SEC13-210ENST00000428626 SLC22A24Q8N4F4 322 aa13.33□□□□□ -0.28
SEC13-210ENST00000428626 DYDC1Q8WWB3 177 aa13.33□□□□□ -0.28
SEC13-210ENST00000428626 SH3GL3Q99963 347 aa13.33□□□□□ -0.28
SEC13-210ENST00000428626 C19orf24Q9BVV8 132 aa13.33□□□□□ -0.28
SEC13-210ENST00000428626 PCDHAC1Q9H158 963 aa13.33□□□□□ -0.28
SEC13-210ENST00000428626 RABEP2Q9H5N1 569 aa13.33□□□□□ -0.28
SEC13-210ENST00000428626 INTS9Q9NV88 658 aaKnown RBP13.33□□□□□ -0.28
SEC13-210ENST00000428626 REV1Q9UBZ9 1251 aa13.33□□□□□ -0.28
SEC13-210ENST00000428626 FBXO9Q9UK97 447 aaPredicted RBP13.33□□□□□ -0.28
SEC13-210ENST00000428626 TRAPPC13A5PLN9 417 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 VSTM5A8MXK1 200 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 M0R233 179 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 ANGPT2O15123 496 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 NCR1O76036 304 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 PGA4P0DJD7 388 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 PGA3P0DJD8 388 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 CCL2P13500 99 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 TNFRSF1BP20333 461 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 EVX1P49640 407 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 CHN2P52757 468 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 CDH15P55291 814 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 NFYCQ13952 458 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 CCNIQ14094 377 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 TRMT5Q32P41 509 aaKnown RBP13.32□□□□□ -0.28
SEC13-210ENST00000428626 TTC33Q6PID6 262 aaPredicted RBP13.32□□□□□ -0.28
SEC13-210ENST00000428626 PIWIL3Q7Z3Z3 882 aaKnown RBP13.32□□□□□ -0.28
SEC13-210ENST00000428626 HPS1Q92902 700 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 YIPF5Q969M3 257 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 C1orf159Q96HA4 380 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 MAGEB18Q96M61 343 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 NPHS2Q9NP85 383 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 NANSQ9NR45 359 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 TMEM38BQ9NVV0 291 aa13.32□□□□□ -0.28
SEC13-210ENST00000428626 FXYD1O00168 92 aa13.31□□□□□ -0.28
SEC13-210ENST00000428626 DHHO43323 396 aa13.31□□□□□ -0.28
SEC13-210ENST00000428626 RNF13O43567 381 aa13.31□□□□□ -0.28
SEC13-210ENST00000428626 EDF1O60869 148 aaKnown RBP13.31□□□□□ -0.28
SEC13-210ENST00000428626 UBL3O95164 117 aa13.31□□□□□ -0.28
SEC13-210ENST00000428626 RAB36O95755 333 aa13.31□□□□□ -0.28
SEC13-210ENST00000428626 CLPTM1O96005 669 aa13.31□□□□□ -0.28
SEC13-210ENST00000428626 SERPINA5P05154 406 aa13.31□□□□□ -0.28
SEC13-210ENST00000428626 ERVS71-1P61550 626 aa13.31□□□□□ -0.28
SEC13-210ENST00000428626 VMACQ2NL98 169 aa13.31□□□□□ -0.28
SEC13-210ENST00000428626 RABL3Q5HYI8 236 aa13.31□□□□□ -0.28
SEC13-210ENST00000428626 PATL1Q86TB9 770 aaKnown RBP13.31□□□□□ -0.28
SEC13-210ENST00000428626 NKAIN4Q8IVV8 208 aa13.31□□□□□ -0.28
SEC13-210ENST00000428626 PFN4Q8NHR9 129 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms