RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 ACSM1Q08AH1 577 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 ARHGAP11BQ3KRB8 267 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 ZNF626Q68DY1 528 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 PARM1Q6UWI2 310 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 C6orf89Q6UWU4 347 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 MED25Q71SY5 747 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 LRRC28Q86X40 367 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-208ENST00000428599 ABHD4Q8TB40 342 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 SLA2Q9H6Q3 261 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 NOX4Q9NPH5 578 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.26□□□□□ -1.095e-7■■■□□ 16.1
CTNND1-208ENST00000428599 NECAP2Q9NVZ3 263 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 CNOT2Q9NZN8 540 aaKnown RBP8.26□□□□□ -1.09
CTNND1-208ENST00000428599 DHCR7Q9UBM7 475 aaKnown RBP8.26□□□□□ -1.09
CTNND1-208ENST00000428599 PIGLQ9Y2B2 252 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 PAPPAQ13219 1627 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 RAB27BO00194 218 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 NME4O00746 187 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 ZNF749O43361 778 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 TXNL1O43396 289 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 CACNG3O60359 315 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 BMP2P12643 396 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 OMGP23515 440 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 PTGER1P34995 402 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 CA5AP35218 305 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 FLI1Q01543 452 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-208ENST00000428599 CDK5R2Q13319 367 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 YOD1Q5VVQ6 348 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-208ENST00000428599 SYT9Q86SS6 491 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 WFDC8Q8IUA0 241 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 SLC22A24Q8N4F4 322 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 OR1S2Q8NGQ3 325 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 OR13C2Q8NGS9 318 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 KATNB1Q9BVA0 655 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 HRH4Q9H3N8 390 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 PLEKHF2Q9H8W4 249 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 SDR39U1Q9NRG7 319 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-208ENST00000428599 FAM212BQ9NTI7 297 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-208ENST00000428599 ANKRD10Q9NXR5 420 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 CDK5RAP2Q96SN8 1893 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 G3V2L1 256 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 SLC35A2P78381 396 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 NLRC3Q7RTR2 1065 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 H2BFWTQ7Z2G1 175 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 GJC3Q8NFK1 279 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 ABHD11Q8NFV4 315 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 SLC25A43Q8WUT9 341 aaPredicted RBP8.26□□□□□ -1.09
CTNND1-208ENST00000428599 TRIB1Q96RU8 372 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 PDCD1LG2Q9BQ51 273 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 LHPPQ9H008 270 aa8.26□□□□□ -1.09
CTNND1-208ENST00000428599 ABCA3Q99758 1704 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 THSD7AQ9UPZ6 1657 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 HSD17B6O14756 317 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 RPS17P08708 135 aaKnown RBP8.25□□□□□ -1.09
CTNND1-208ENST00000428599 POU2F2P09086 479 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 ATXN1LP0C7T5 689 aaKnown RBP8.25□□□□□ -1.09
CTNND1-208ENST00000428599 OR1D5P58170 312 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 DUSP6Q16828 381 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 RTL8BQ17RB0 113 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 ZNF468Q5VIY5 522 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-208ENST00000428599 ADAMTSL4Q6UY14 1074 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 DBX2Q6ZNG2 339 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.25□□□□□ -1.09
CTNND1-208ENST00000428599 TMEM104Q8NE00 496 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 FGGYQ96C11 551 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 M0R1B8 84 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 TEKQ02763 1124 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 CRMP1Q14194 572 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 SELPLGQ14242 412 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 DPPA2Q7Z7J5 298 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 OR6V1Q8N148 313 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 FAM122AQ96E09 287 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 ALG12Q9BV10 488 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 SUCNR1Q9BXA5 334 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 MFRPQ9BY79 579 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 ZNF436Q9C0F3 470 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-208ENST00000428599 MED17Q9NVC6 651 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 WBP1LQ9NX94 342 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 EBF1Q9UH73 591 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 H0Y8G0 127 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 AQP7O14520 342 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 HLA-HP01893 362 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 RAP2BP61225 183 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 VWA2Q5GFL6 755 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 SLC35D2Q76EJ3 337 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 DTWD1Q8N5C7 304 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 ASB11Q8WXH4 323 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 KHSRPQ92945 711 aaKnown RBP eCLIP8.25□□□□□ -1.094e-7■■□□□ 12.3
CTNND1-208ENST00000428599 CMTM3Q96MX0 182 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 TCEAL7Q9BRU2 100 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 DEFB127Q9H1M4 99 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 FBXO4Q9UKT5 387 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 PRRC2BQ5JSZ5 2229 aaKnown RBP8.25□□□□□ -1.09
CTNND1-208ENST00000428599 MYO5AQ9Y4I1 1855 aaKnown RBP8.25□□□□□ -1.09
CTNND1-208ENST00000428599 EVPLQ92817 2033 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 SLC5A10A0PJK1 596 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 H3BMQ9 156 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 H7C1C5 153 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 HPGDSO60760 199 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 GLAP06280 429 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms