RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 RNF170Q96K19 258 aa13.38□□□□□ -0.27
PTPRU-204ENST00000428026 METTL9Q9H1A3 318 aa13.38□□□□□ -0.27
PTPRU-204ENST00000428026 SLC39A9Q9NUM3 307 aa13.38□□□□□ -0.27
PTPRU-204ENST00000428026 DDX60LQ5H9U9 1706 aaKnown RBP13.38□□□□□ -0.27
PTPRU-204ENST00000428026 A0A0A6YYJ9 748 aa13.38□□□□□ -0.27
PTPRU-204ENST00000428026 SRMP19623 302 aa13.38□□□□□ -0.27
PTPRU-204ENST00000428026 MMP11P24347 488 aa13.38□□□□□ -0.27
PTPRU-204ENST00000428026 MTCP1P56278 107 aa13.38□□□□□ -0.27
PTPRU-204ENST00000428026 PKDCCQ504Y2 493 aa13.38□□□□□ -0.27
PTPRU-204ENST00000428026 GDF7Q7Z4P5 450 aa13.38□□□□□ -0.27
PTPRU-204ENST00000428026 RNF113BQ8IZP6 322 aaKnown RBP13.38□□□□□ -0.27
PTPRU-204ENST00000428026 FAM3DQ96BQ1 224 aa13.38□□□□□ -0.27
PTPRU-204ENST00000428026 CTRCQ99895 268 aa13.38□□□□□ -0.27
PTPRU-204ENST00000428026 UBQLN4Q9NRR5 601 aa13.38□□□□□ -0.27
PTPRU-204ENST00000428026 STEAP1Q9UHE8 339 aa13.38□□□□□ -0.27
PTPRU-204ENST00000428026 ZFP92A6NM28 416 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 H0YIV9 168 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 TAPBPO15533 448 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 CASP6P55212 293 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 DGCR2P98153 550 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 MAT1AQ00266 395 aaKnown RBP13.37□□□□□ -0.27
PTPRU-204ENST00000428026 TLE1Q04724 770 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 KIR2DS3Q14952 304 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 RELL2Q8NC24 303 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-204ENST00000428026 ACAD8Q9UKU7 415 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 FOXE1O00358 373 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-204ENST00000428026 IGHG1P01857 330 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 APOA2P02652 100 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 ZDHHC11BP0C7U3 371 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 AARDQ4LEZ3 155 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 ACTBL2Q562R1 376 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 TOR2AQ5JU69 321 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 SYT9Q86SS6 491 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 ZNF845Q96IR2 970 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-204ENST00000428026 CUTCQ9NTM9 273 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 SLC23A2Q9UGH3 650 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 A3GALT2U3KPV4 340 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 PTPRZ1P23471 2315 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-204ENST00000428026 TRAPPC2LH3BP13 241 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 SULT1C4O75897 302 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 PMS2P2O95744 297 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 BTG1P62324 171 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 ZP2Q05996 745 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 BAXQ07812 192 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 ASAH1Q13510 395 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 RTL6Q6ICC9 239 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 BRICD5Q6PL45 260 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 TMEM207Q6UWW9 146 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 DLEU7Q6UYE1 221 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 MDGA2Q7Z553 956 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 SPNS2Q8IVW8 549 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 PPP1R35Q8TAP8 253 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 SGPP1Q9BX95 441 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 CDCP1Q9H5V8 836 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 FITM1A5D6W6 292 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 B3GALT4O96024 378 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 KLKB1P03952 638 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 ADRB1P08588 477 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 TACR3P29371 465 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 ALKBH1Q13686 389 aaKnown RBP13.37□□□□□ -0.27
PTPRU-204ENST00000428026 FAAP20Q6NZ36 180 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 BCL7CQ8WUZ0 217 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-204ENST00000428026 PSMF1Q92530 271 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 ISG20Q96AZ6 181 aaKnown RBP13.37□□□□□ -0.27
PTPRU-204ENST00000428026 PHF7Q9BWX1 381 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-204ENST00000428026 ADAM19Q9H013 955 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 PPP1R14DQ9NXH3 145 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 CHST2Q9Y4C5 530 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 H7C1Q1 480 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 PHF1O43189 567 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-204ENST00000428026 SLC19A1P41440 591 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 ZNF610Q8N9Z0 462 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 OR52I2Q8NH67 350 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 MITD1Q8WV92 249 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 RASD2Q96D21 266 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 HIF1ANQ9NWT6 349 aa13.37□□□□□ -0.27
PTPRU-204ENST00000428026 CGGBP1Q9UFW8 167 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-204ENST00000428026 IL2RGP31785 369 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 P2RX3P56373 397 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 PRDX1Q06830 199 aaKnown RBP13.36□□□□□ -0.27
PTPRU-204ENST00000428026 SLC14A2Q15849 920 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 C2orf76Q3KRA6 126 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 RNLSQ5VYX0 342 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 DCLRE1CQ96SD1 692 aaKnown RBP13.36□□□□□ -0.27
PTPRU-204ENST00000428026 KLHL42Q9P2K6 505 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 HBE1P02100 147 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 GCH1P30793 250 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 HCCSP53701 268 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 HTRA4P83105 476 aaPredicted RBP13.36□□□□□ -0.27
PTPRU-204ENST00000428026 PHLDA2Q53GA4 152 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 RBMS3Q6XE24 437 aaKnown RBP13.36□□□□□ -0.27
PTPRU-204ENST00000428026 RAB39BQ96DA2 213 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 SLC39A13Q96H72 371 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 INSM2Q96T92 566 aaPredicted RBP13.36□□□□□ -0.27
PTPRU-204ENST00000428026 CHST8Q9H2A9 424 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 OSGIN2Q9Y236 505 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 ENTPD2Q9Y5L3 495 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 UBR3Q6ZT12 1888 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 C2orf72A6NCS6 295 aa13.36□□□□□ -0.27
PTPRU-204ENST00000428026 LGI1O95970 557 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms