RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TMEM54Q969K7 222 aa15.93■□□□□ 0.14
PSPC1-202ENST00000427943 PLK3Q9H4B4 646 aa15.93■□□□□ 0.14
PSPC1-202ENST00000427943 CCDC134Q9H6E4 229 aa15.93■□□□□ 0.14
PSPC1-202ENST00000427943 ZNF442Q9H7R0 627 aa15.93■□□□□ 0.14
PSPC1-202ENST00000427943 GLTPQ9NZD2 209 aa15.93■□□□□ 0.14
PSPC1-202ENST00000427943 GMPR2Q9P2T1 348 aaKnown RBP15.93■□□□□ 0.14
PSPC1-202ENST00000427943 BLOC1S5-TXNDC5H3BN57 136 aa15.92■□□□□ 0.14
PSPC1-202ENST00000427943 hCG_2039718K7EN88 272 aa15.92■□□□□ 0.14
PSPC1-202ENST00000427943 TLX2O43763 284 aaPredicted RBP15.92■□□□□ 0.14
PSPC1-202ENST00000427943 ZNF14P17017 642 aaPredicted RBP15.92■□□□□ 0.14
PSPC1-202ENST00000427943 NPR2P20594 1047 aa15.92■□□□□ 0.14
PSPC1-202ENST00000427943 LOXL1Q08397 574 aaPredicted RBP15.92■□□□□ 0.14
PSPC1-202ENST00000427943 PIN1Q13526 163 aaPredicted RBP15.92■□□□□ 0.14
PSPC1-202ENST00000427943 DAG1Q14118 895 aa15.92■□□□□ 0.14
PSPC1-202ENST00000427943 CYBRD1Q53TN4 286 aa15.92■□□□□ 0.14
PSPC1-202ENST00000427943 HSP90B2PQ58FF3 399 aa15.92■□□□□ 0.14
PSPC1-202ENST00000427943 SPATA21Q7Z572 469 aa15.92■□□□□ 0.14
PSPC1-202ENST00000427943 SVOPLQ8N434 492 aa15.92■□□□□ 0.14
PSPC1-202ENST00000427943 OR2T12Q8NG77 320 aa15.92■□□□□ 0.14
PSPC1-202ENST00000427943 ZNF566Q969W8 418 aa15.92■□□□□ 0.14
PSPC1-202ENST00000427943 TPD52L3Q96J77 140 aa15.92■□□□□ 0.14
PSPC1-202ENST00000427943 ZNF75AQ96N20 296 aa15.92■□□□□ 0.14
PSPC1-202ENST00000427943 TNFRSF13CQ96RJ3 184 aa15.92■□□□□ 0.14
PSPC1-202ENST00000427943 C20orf141Q9NUB4 165 aa15.92■□□□□ 0.14
PSPC1-202ENST00000427943 RIMS3Q9UJD0 308 aa15.92■□□□□ 0.14
PSPC1-202ENST00000427943 OR7A10O76100 309 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 OR5F1O95221 314 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 IFNA14P01570 189 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 MT-ND1P03886 318 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 F13BP05160 661 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 PATE4P0C8F1 98 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 PGA4P0DJD7 388 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 PGA3P0DJD8 388 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 KDELR2P33947 212 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 GIPRP48546 466 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 PPOXP50336 477 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 PDLIM4P50479 330 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 RPL18Q07020 188 aaKnown RBP15.91■□□□□ 0.14
PSPC1-202ENST00000427943 MICU2Q8IYU8 434 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 CDK20Q8IZL9 346 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 FGFBP3Q8TAT2 258 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 TMEM239Q8WW34 195 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 SLC25A44Q96H78 314 aaPredicted RBP15.91■□□□□ 0.14
PSPC1-202ENST00000427943 MALRD1Q5VYJ5 2156 aa15.91■□□□□ 0.14
PSPC1-202ENST00000427943 RTTNQ86VV8 2226 aa15.9■□□□□ 0.14
PSPC1-202ENST00000427943 SH3PXD2BA1X283 911 aa15.9■□□□□ 0.14
PSPC1-202ENST00000427943 PIP5K1CO60331 668 aa15.9■□□□□ 0.14
PSPC1-202ENST00000427943 RAB36O95755 333 aa15.9■□□□□ 0.14
PSPC1-202ENST00000427943 BCL10O95999 233 aa15.9■□□□□ 0.14
PSPC1-202ENST00000427943 FUT1P19526 365 aa15.9■□□□□ 0.14
PSPC1-202ENST00000427943 RBM34P42696 430 aaKnown RBP15.9■□□□□ 0.14
PSPC1-202ENST00000427943 RAB1AP62820 205 aa15.9■□□□□ 0.14
PSPC1-202ENST00000427943 VLDLRP98155 873 aa15.9■□□□□ 0.14
PSPC1-202ENST00000427943 MYBPC1Q00872 1141 aa15.9■□□□□ 0.14
PSPC1-202ENST00000427943 GGTLC2Q14390 218 aa15.9■□□□□ 0.14
PSPC1-202ENST00000427943 C6orf52Q5T4I8 152 aa15.9■□□□□ 0.14
PSPC1-202ENST00000427943 SKA3Q8IX90 412 aa15.9■□□□□ 0.14
PSPC1-202ENST00000427943 IL17RDQ8NFM7 739 aa15.9■□□□□ 0.14
PSPC1-202ENST00000427943 SGTBQ96EQ0 304 aa15.9■□□□□ 0.14
PSPC1-202ENST00000427943 PIMREGQ9BSJ6 248 aa15.9■□□□□ 0.14
PSPC1-202ENST00000427943 POLR2J2Q9GZM3 115 aaKnown RBP15.9■□□□□ 0.14
PSPC1-202ENST00000427943 POLR2J3Q9H1A7 115 aaKnown RBP15.9■□□□□ 0.14
PSPC1-202ENST00000427943 CMTM6Q9NX76 183 aa15.9■□□□□ 0.14
PSPC1-202ENST00000427943 TMEM129A0AVI4 362 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 ELOVL7A1L3X0 281 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 A8MV72 311 aaPredicted RBP15.89■□□□□ 0.13
PSPC1-202ENST00000427943 VWC2LB2RUY7 222 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 MCIDASD6RGH6 385 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 SLC22A2O15244 555 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 DHHO43323 396 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 UBL3O95164 117 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 ZNF16P17020 682 aaPredicted RBP15.89■□□□□ 0.13
PSPC1-202ENST00000427943 USF1P22415 310 aaPredicted RBP15.89■□□□□ 0.13
PSPC1-202ENST00000427943 AQP2P41181 271 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 CLRN1P58418 232 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 RUNX1T1Q06455 604 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 RAB39AQ14964 217 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 MSMPQ1L6U9 139 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 LRFN4Q6PJG9 635 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 PIWIL3Q7Z3Z3 882 aaKnown RBP15.89■□□□□ 0.13
PSPC1-202ENST00000427943 ZCCHC24Q8N2G6 241 aaKnown RBP15.89■□□□□ 0.13
PSPC1-202ENST00000427943 SLC22A24Q8N4F4 322 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 NOXO1Q8NFA2 376 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 ZNF347Q96SE7 839 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 DOK1Q99704 481 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 SH3GL3Q99963 347 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 DYNLRB1Q9NP97 96 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 TMEM38BQ9NVV0 291 aa15.89■□□□□ 0.13
PSPC1-202ENST00000427943 A0A1W2PRG6 482 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 VSTM5A8MXK1 200 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 IGHG1P01857 330 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 QDPRP09417 244 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 IGHV4-31P0DP07 118 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 COX4I1P13073 169 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 NR4A1P22736 598 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 MDH1P40925 334 aaKnown RBP15.88■□□□□ 0.13
PSPC1-202ENST00000427943 NR4A2P43354 598 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 ZNF584Q8IVC4 421 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 MOSPD2Q8NHP6 518 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 RP9Q8TA86 221 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms