RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 IGHV4-38-2P0DP08 117 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 ECHS1P30084 290 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 ERVS71-1P61550 626 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 TXNL4AP83876 142 aaKnown RBP11.98□□□□□ -0.49
HDAC6-206ENST00000426196 HLXQ14774 488 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-206ENST00000426196 PCLAFQ15004 111 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 PDCD1Q15116 288 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 FAM69AQ5T7M9 428 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 ZNF836Q6ZNA1 936 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 H1FNTQ75WM6 255 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-206ENST00000426196 KLHL36Q8N4N3 616 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 OR6N1Q8NGY5 312 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 OR52P1PQ8NH57 321 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 ZDHHC16Q969W1 377 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 KTI12Q96EK9 354 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-206ENST00000426196 DIRC2Q96SL1 478 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 SLC30A2Q9BRI3 323 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 EMC6Q9BV81 110 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 BCL2L14Q9BZR8 327 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 EGLN1Q9GZT9 426 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 C1orf198Q9H425 327 aa11.98□□□□□ -0.49
HDAC6-206ENST00000426196 PLSCR5A0PG75 271 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 C3orf80F5H4A9 247 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 COPEO14579 308 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 PLXNB1O43157 2135 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 RIPK2O43353 540 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 SPRY3O43610 288 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 NPHS1O60500 1241 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 FZD7O75084 574 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 UBOX5O94941 541 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 TSPAN15O95858 294 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 SBK2P0C263 348 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 PATE4P0C8F1 98 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 NQO1P15559 274 aaKnown RBP11.97□□□□□ -0.49
HDAC6-206ENST00000426196 GRPRP30550 384 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 ARRB2P32121 409 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 EGR4Q05215 589 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 PMS2P3Q13401 168 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 TBC1D28Q2M2D7 210 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 FIP1L1Q6UN15 594 aaKnown RBP11.97□□□□□ -0.49
HDAC6-206ENST00000426196 C5orf46Q6UWT4 87 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 TRMT10CQ7L0Y3 403 aaKnown RBP11.97□□□□□ -0.49
HDAC6-206ENST00000426196 PIWIL3Q7Z3Z3 882 aaKnown RBP11.97□□□□□ -0.49
HDAC6-206ENST00000426196 JAZF1Q86VZ6 243 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 VRK2Q86Y07 508 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 PAQR4Q8N4S7 273 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-206ENST00000426196 ADPRHL1Q8NDY3 354 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 SLC38A4Q969I6 547 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 LRMDAQ9H2I8 198 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 CACYBPQ9HB71 228 aaKnown RBP11.97□□□□□ -0.49
HDAC6-206ENST00000426196 C1RLQ9NZP8 487 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 OR5V1Q9UGF6 321 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 NPTNQ9Y639 398 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 NOTCH3Q9UM47 2321 aa11.97□□□□□ -0.49
HDAC6-206ENST00000426196 TRAV40A0A0B4J280 105 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 MDFIC2A0A1B0GVS7 189 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 ZNF726A6NNF4 738 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 A8MXK9 166 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 SRRM5B3KS81 715 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 SNAP29O95721 258 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 PTHP01270 115 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 IGHV1-46P01743 117 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 IGHV3-13P01766 116 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 PPIAL4GP0DN37 164 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 CCL2P13500 99 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 PRG2P13727 222 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 SELEP16581 610 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 UCP2P55851 309 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 EMX2Q04743 252 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 LARS2Q15031 903 aaKnown RBP11.96□□□□□ -0.49
HDAC6-206ENST00000426196 ESCO2Q56NI9 601 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 RNF220Q5VTB9 566 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 FAM205BPQ63HN1 556 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 SKA3Q8IX90 412 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 MIER2Q8N344 545 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 TRIML2Q8N7C3 387 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 OR1J2Q8NGS2 313 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 FAM110DQ8TAY7 271 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-206ENST00000426196 ARMC7Q9H6L4 198 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 PATZ1Q9HBE1 687 aaKnown RBP11.96□□□□□ -0.49
HDAC6-206ENST00000426196 NPHS2Q9NP85 383 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 TNFRSF19Q9NS68 423 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 ASIC5Q9NY37 505 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 ZNF443Q9Y2A4 671 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-206ENST00000426196 RNF114Q9Y508 228 aa11.96□□□□□ -0.49
HDAC6-206ENST00000426196 SOX21Q9Y651 276 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-206ENST00000426196 TM9SF1O15321 606 aa11.95□□□□□ -0.5
HDAC6-206ENST00000426196 ERLIN1O75477 346 aa11.95□□□□□ -0.5
HDAC6-206ENST00000426196 PLATP00750 562 aa11.95□□□□□ -0.5
HDAC6-206ENST00000426196 IGHV2-70P01814 119 aa11.95□□□□□ -0.5
HDAC6-206ENST00000426196 HLA-DOBP13765 273 aa11.95□□□□□ -0.5
HDAC6-206ENST00000426196 SLC6A9P48067 706 aa11.95□□□□□ -0.5
HDAC6-206ENST00000426196 CSNK1A1P48729 337 aa11.95□□□□□ -0.5
HDAC6-206ENST00000426196 RELBQ01201 579 aa11.95□□□□□ -0.5
HDAC6-206ENST00000426196 PAX8Q06710 450 aa11.95□□□□□ -0.5
HDAC6-206ENST00000426196 CASP8Q14790 479 aa11.95□□□□□ -0.5
HDAC6-206ENST00000426196 C2orf68Q2NKX9 166 aa11.95□□□□□ -0.5
HDAC6-206ENST00000426196 TMEM53Q6P2H8 277 aa11.95□□□□□ -0.5
HDAC6-206ENST00000426196 BTNL3Q6UXE8 466 aa11.95□□□□□ -0.5
HDAC6-206ENST00000426196 Q6ZPA2 131 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms