RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 SCYL2Q6P3W7 929 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 SPNS3Q6ZMD2 512 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 CLEC20AQ6ZU45 233 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 KIAA1328Q86T90 577 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 LRRC49Q8IUZ0 686 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 ZNF679Q8IYX0 411 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 ARHGAP18Q8N392 663 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 OR6C4Q8NGE1 309 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 RFESDQ8TAC1 157 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 RPL3LQ92901 407 aaKnown RBP4.82□□□□□ -1.64
SSBP3-207ENST00000426150 CCDC127Q96BQ5 260 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 PSKH2Q96QS6 385 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 TRIM51Q9BSJ1 452 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 TUBGCP2Q9BSJ2 902 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 SLC17A9Q9BYT1 436 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 VCX2Q9H322 139 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 CSNK1G1Q9HCP0 422 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 AMBNQ9NP70 447 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 SAMSN1Q9NSI8 373 aaKnown RBP4.82□□□□□ -1.64
SSBP3-207ENST00000426150 MRPL39Q9NYK5 338 aaKnown RBP4.82□□□□□ -1.64
SSBP3-207ENST00000426150 MDFICQ9P1T7 246 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 ANAPC7Q9UJX3 599 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 RNF24Q9Y225 148 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 SPACA6W5XKT8 324 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 JMJD1CQ15652 2540 aa4.82□□□□□ -1.64
SSBP3-207ENST00000426150 AKAP9Q99996 3911 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 ACANP16112 2415 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 CROCCQ5TZA2 2017 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 LRRTM2O43300 516 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 EFNA2O43921 213 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 GPRIN2O60269 458 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 RAMP1O60894 148 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 ALPIP09923 528 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 BCKDHAP12694 445 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 TBXA2RP21731 343 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 GTF2H1P32780 548 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 CASP4P49662 377 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 RPS24P62847 133 aaKnown RBP4.81□□□□□ -1.64
SSBP3-207ENST00000426150 RPS21P63220 83 aaKnown RBP4.81□□□□□ -1.64
SSBP3-207ENST00000426150 CYP24A1Q07973 514 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 TMEM52BQ4KMG9 183 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 PMF1Q6P1K2 205 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 DOK6Q6PKX4 331 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 REG3GQ6UW15 175 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 GKN2Q86XP6 184 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 ANKFN1Q8N957 763 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 EIF1ADQ8N9N8 165 aaKnown RBP4.81□□□□□ -1.64
SSBP3-207ENST00000426150 OR4Q3Q8NH05 313 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 TRMT10AQ8TBZ6 339 aaKnown RBP4.81□□□□□ -1.64
SSBP3-207ENST00000426150 C19orf60Q96EN9 201 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 CCT7Q99832 543 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 LRRC40Q9H9A6 602 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 MEPEQ9NQ76 525 aaPredicted RBP4.81□□□□□ -1.64
SSBP3-207ENST00000426150 C6orf203Q9P0P8 240 aaPredicted RBP4.81□□□□□ -1.64
SSBP3-207ENST00000426150 WDR45Q9Y484 360 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 GMPPBQ9Y5P6 360 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 MRPS18BQ9Y676 258 aaKnown RBP4.81□□□□□ -1.64
SSBP3-207ENST00000426150 DOCK4Q8N1I0 1966 aa4.81□□□□□ -1.64
SSBP3-207ENST00000426150 CSPG4Q6UVK1 2322 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 NYNRINQ9P2P1 1898 aaKnown RBP4.8□□□□□ -1.64
SSBP3-207ENST00000426150 A0A1B0GTH9 108 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 ZSCAN5BA6NJL1 495 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 PES1O00541 588 aaKnown RBP4.8□□□□□ -1.64
SSBP3-207ENST00000426150 RAD51BO15315 384 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 SNX4O95219 450 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 CD99P14209 185 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 COX6B1P14854 86 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 PVRP15151 417 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 CD1EP15812 388 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 TPSB2P20231 275 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 IGFBP5P24593 272 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 RPL4P36578 427 aaKnown RBP4.8□□□□□ -1.64
SSBP3-207ENST00000426150 BDKRB1P46663 353 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 EWSR1Q01844 656 aaKnown RBP eCLIP4.8□□□□□ -1.64
SSBP3-207ENST00000426150 PAX8Q06710 450 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 PDK3Q15120 406 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 TPSAB1Q15661 275 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 SYPL1Q16563 259 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 CNPY1Q3B7I2 92 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 HSP90AA4PQ58FG1 418 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 ZNF506Q5JVG8 444 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 TPRG1LQ5T0D9 272 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 PIP5KL1Q5T9C9 394 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 FAAP20Q6NZ36 180 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 STAC2Q6ZMT1 411 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 TMUB2Q71RG4 321 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 TMEM135Q86UB9 458 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 ZNF683Q8IZ20 524 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 ABHD12Q8N2K0 398 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 Q8N377 158 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 ZSCAN4Q8NAM6 433 aaPredicted RBP4.8□□□□□ -1.64
SSBP3-207ENST00000426150 M1APQ8TC57 530 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 NDRG1Q92597 394 aaKnown RBP4.8□□□□□ -1.64
SSBP3-207ENST00000426150 EMG1Q92979 244 aaKnown RBP4.8□□□□□ -1.64
SSBP3-207ENST00000426150 FAM131CQ96AQ9 280 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 SDSLQ96GA7 329 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 SECISBP2Q96T21 854 aaKnown RBP4.8□□□□□ -1.64
SSBP3-207ENST00000426150 CTRCQ99895 268 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 DDA1Q9BW61 102 aa4.8□□□□□ -1.64
SSBP3-207ENST00000426150 HEXA-AS1Q9H8Q6 139 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms