RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 CRLF2Q9HC73 371 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 GLTPQ9NZD2 209 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 FREM1Q5H8C1 2179 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 UTP20O75691 2785 aaKnown RBP21.53■■□□□ 1.04
VEGFA-209ENST00000425836 CIB4A0PJX0 185 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 GSTM3P21266 225 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 ACVR1BP36896 505 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 ARIH2OSQ8N7S6 290 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 HDAC2Q92769 488 aaKnown RBP21.53■■□□□ 1.04
VEGFA-209ENST00000425836 CENPNQ96H22 339 aaPredicted RBP21.53■■□□□ 1.04
VEGFA-209ENST00000425836 EGLN3Q9H6Z9 239 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 S100A14Q9HCY8 104 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 STX18Q9P2W9 335 aaKnown RBP21.53■■□□□ 1.04
VEGFA-209ENST00000425836 GRHPRQ9UBQ7 328 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 CDH10Q9Y6N8 788 aa21.53■■□□□ 1.04
VEGFA-209ENST00000425836 SH3D21A4FU49 640 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 CENPBD1B2RD01 187 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 RAD51DO75771 328 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 PPP3CBP16298 524 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 SLC6A6P31641 620 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 COX10Q12887 443 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 GABRA6Q16445 453 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 HIST3H3Q16695 136 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 FAM205BPQ63HN1 556 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 LRFN4Q6PJG9 635 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 SYT14Q8NB59 555 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 Q96M85 177 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 DACH2Q96NX9 599 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 MUS81Q96NY9 551 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 PKP2Q99959 881 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 ULBP2Q9BZM5 246 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 SEMA6AQ9H2E6 1030 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 SLC24A3Q9HC58 644 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 B3GAT2Q9NPZ5 323 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 IL20Q9NYY1 176 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 IER3IP1Q9Y5U9 82 aa21.52■■□□□ 1.04
VEGFA-209ENST00000425836 A6NIZ1 184 aa21.51■■□□□ 1.03
VEGFA-209ENST00000425836 ANXA8P13928 327 aa21.51■■□□□ 1.03
VEGFA-209ENST00000425836 CDH2P19022 906 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-209ENST00000425836 CLRN1P58418 232 aa21.51■■□□□ 1.03
VEGFA-209ENST00000425836 RAP1BP61224 184 aa21.51■■□□□ 1.03
VEGFA-209ENST00000425836 RAP1AP62834 184 aa21.51■■□□□ 1.03
VEGFA-209ENST00000425836 TGFBR3Q03167 851 aa21.51■■□□□ 1.03
VEGFA-209ENST00000425836 CEACAM16Q2WEN9 425 aa21.51■■□□□ 1.03
VEGFA-209ENST00000425836 HIPK1Q86Z02 1210 aa21.51■■□□□ 1.03
VEGFA-209ENST00000425836 NOXO1Q8NFA2 376 aa21.51■■□□□ 1.03
VEGFA-209ENST00000425836 FAM222BQ8WU58 562 aa21.51■■□□□ 1.03
VEGFA-209ENST00000425836 KCNK17Q96T54 332 aa21.51■■□□□ 1.03
VEGFA-209ENST00000425836 MED18Q9BUE0 208 aa21.51■■□□□ 1.03
VEGFA-209ENST00000425836 PLA2G12AQ9BZM1 189 aa21.51■■□□□ 1.03
VEGFA-209ENST00000425836 PPP1R3DO95685 299 aa21.5■■□□□ 1.03
VEGFA-209ENST00000425836 TP53P04637 393 aaPredicted RBP21.5■■□□□ 1.03
VEGFA-209ENST00000425836 IGFBP1P08833 259 aaPredicted RBP21.5■■□□□ 1.03
VEGFA-209ENST00000425836 EPXP11678 715 aa21.5■■□□□ 1.03
VEGFA-209ENST00000425836 GPR139Q6DWJ6 353 aa21.5■■□□□ 1.03
VEGFA-209ENST00000425836 OR7E24Q6IFN5 339 aa21.5■■□□□ 1.03
VEGFA-209ENST00000425836 RPL13AP3Q6NVV1 102 aa21.5■■□□□ 1.03
VEGFA-209ENST00000425836 KLHL17Q6TDP4 642 aa21.5■■□□□ 1.03
VEGFA-209ENST00000425836 CLDN22Q8N7P3 220 aa21.5■■□□□ 1.03
VEGFA-209ENST00000425836 C1orf162Q8NEQ5 155 aaPredicted RBP21.5■■□□□ 1.03
VEGFA-209ENST00000425836 ZNF570Q96NI8 536 aa21.5■■□□□ 1.03
VEGFA-209ENST00000425836 USB1Q9BQ65 265 aaKnown RBP21.5■■□□□ 1.03
VEGFA-209ENST00000425836 IFT27Q9BW83 186 aa21.5■■□□□ 1.03
VEGFA-209ENST00000425836 REV1Q9UBZ9 1251 aa21.5■■□□□ 1.03
VEGFA-209ENST00000425836 TEX13CA0A0J9YWL9 993 aa21.49■■□□□ 1.03
VEGFA-209ENST00000425836 G3V2T6 193 aa21.49■■□□□ 1.03
VEGFA-209ENST00000425836 TXNDC12O95881 172 aa21.49■■□□□ 1.03
VEGFA-209ENST00000425836 THBDP07204 575 aa21.49■■□□□ 1.03
VEGFA-209ENST00000425836 QDPRP09417 244 aa21.49■■□□□ 1.03
VEGFA-209ENST00000425836 APEHP13798 732 aaKnown RBP21.49■■□□□ 1.03
VEGFA-209ENST00000425836 SDHAP31040 664 aa21.49■■□□□ 1.03
VEGFA-209ENST00000425836 RPS6KA3P51812 740 aa21.49■■□□□ 1.03
VEGFA-209ENST00000425836 ARF1P84077 181 aaKnown RBP21.49■■□□□ 1.03
VEGFA-209ENST00000425836 ZNF787Q6DD87 383 aa21.49■■□□□ 1.03
VEGFA-209ENST00000425836 ATG16L2Q8NAA4 619 aa21.49■■□□□ 1.03
VEGFA-209ENST00000425836 OR8D4Q8NGM9 314 aa21.49■■□□□ 1.03
VEGFA-209ENST00000425836 RASD2Q96D21 266 aa21.49■■□□□ 1.03
VEGFA-209ENST00000425836 NMD3Q96D46 503 aaKnown RBP21.49■■□□□ 1.03
VEGFA-209ENST00000425836 ERMAPQ96PL5 475 aaPredicted RBP21.49■■□□□ 1.03
VEGFA-209ENST00000425836 ALG12Q9BV10 488 aa21.49■■□□□ 1.03
VEGFA-209ENST00000425836 KCNN3Q9UGI6 736 aa21.49■■□□□ 1.03
VEGFA-209ENST00000425836 OR5H1A6NKK0 313 aa21.48■■□□□ 1.03
VEGFA-209ENST00000425836 ARPC3O15145 178 aa21.48■■□□□ 1.03
VEGFA-209ENST00000425836 ARHGEF9O43307 516 aa21.48■■□□□ 1.03
VEGFA-209ENST00000425836 SOX14O95416 240 aa21.48■■□□□ 1.03
VEGFA-209ENST00000425836 ZNF23P17027 643 aa21.48■■□□□ 1.03
VEGFA-209ENST00000425836 MYBPC1Q00872 1141 aa21.48■■□□□ 1.03
VEGFA-209ENST00000425836 STK11Q15831 433 aa21.48■■□□□ 1.03
VEGFA-209ENST00000425836 MESTQ5EB52 335 aa21.48■■□□□ 1.03
VEGFA-209ENST00000425836 CLEC12AQ5QGZ9 265 aa21.48■■□□□ 1.03
VEGFA-209ENST00000425836 FAHD1Q6P587 224 aa21.48■■□□□ 1.03
VEGFA-209ENST00000425836 ZDHHC13Q8IUH4 622 aa21.48■■□□□ 1.03
VEGFA-209ENST00000425836 OR1K1Q8NGR3 316 aa21.48■■□□□ 1.03
VEGFA-209ENST00000425836 MAGEE2Q8TD90 523 aaPredicted RBP21.48■■□□□ 1.03
VEGFA-209ENST00000425836 HSD17B8Q92506 261 aa21.48■■□□□ 1.03
VEGFA-209ENST00000425836 MCHR2Q969V1 340 aa21.48■■□□□ 1.03
VEGFA-209ENST00000425836 ZC3HAV1LQ96H79 300 aaKnown RBP21.48■■□□□ 1.03
VEGFA-209ENST00000425836 BOD1Q96IK1 185 aa21.48■■□□□ 1.03
VEGFA-209ENST00000425836 ZNF556Q9HAH1 456 aa21.48■■□□□ 1.03
VEGFA-209ENST00000425836 ALPK2Q86TB3 2170 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms