RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 FBXL3Q9UKT7 428 aa6.85□□□□□ -1.31
SMARCC1-202ENST00000425518 A0A0J9YY10 115 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 EFCAB7A8K855 629 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 SNRPGP15A8MWD9 76 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 C11orf98E9PRG8 122 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 F5H5P2 479 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 OR2A4O95047 310 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 CELA2BP08218 269 aaPredicted RBP6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 CCKBRP32239 447 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 FNTBP49356 437 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 RBMS2Q15434 407 aaKnown RBP6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 OR7E24Q6IFN5 339 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 RGS7BPQ6MZT1 257 aaPredicted RBP6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 ARSKQ6UWY0 536 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 SLC35D2Q76EJ3 337 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 LRRTM1Q86UE6 522 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 SLC43A2Q8N370 569 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 AVL9Q8NBF6 648 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 RELL2Q8NC24 303 aaPredicted RBP6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 ZNF563Q8TA94 476 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 RSC1A1Q92681 617 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 KLHL15Q96M94 604 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 LRFN5Q96NI6 719 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 OR2A7Q96R45 310 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 LMF2Q9BU23 707 aaKnown RBP6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 G6PC3Q9BUM1 346 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 REG4Q9BYZ8 158 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 SYT4Q9H2B2 425 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 PRTFDC1Q9NRG1 225 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 OPN4Q9UHM6 478 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 IGKV1D-42A0A075B6H8 117 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 H7C417 338 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 XRCC3O43542 346 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 DOK2O60496 412 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 AKR7A3O95154 331 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 CD3DP04234 171 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 CT45A8P0DMV1 189 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 CT45A9P0DMV2 189 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 EPHA4P54764 986 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 GMFBP60983 142 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 ZNF141Q15928 474 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 CSRP2Q16527 193 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 CT45A2Q5DJT8 189 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 ZNF684Q5T5D7 378 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 LRRN1Q6UXK5 716 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 Q6ZSR6 202 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 TAF8Q7Z7C8 310 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 STPG2Q8N412 459 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 OR2AK2Q8NG84 335 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 GPR148Q8TDV2 347 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 PMEPA1Q969W9 287 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 MFFQ9GZY8 342 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 ATG5Q9H1Y0 275 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 SFXN1Q9H9B4 322 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 ZMAT3Q9HA38 289 aaKnown RBP6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 MTFP1Q9UDX5 166 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 A6NCN8 305 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 MFSD2BA6NFX1 497 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 OR4C45A6NMZ5 311 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 SIGLEC5O15389 551 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 PLGP00747 810 aaPredicted RBP6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 POU3F4P49335 361 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 SIGLEC14Q08ET2 396 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 CD226Q15762 336 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 GSG1LQ6UXU4 331 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 CFAP77Q6ZQR2 320 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 ZNF627Q7L945 461 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 KCTD20Q7Z5Y7 419 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 SDR16C5Q8N3Y7 309 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 SLC37A2Q8TED4 501 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 C15orf40Q8WUR7 153 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 ATOH1Q92858 354 aaPredicted RBP6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 AMELYQ99218 206 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 LPAR4Q99677 370 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 OR10A5Q9H207 317 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 PRDM9Q9NQV7 894 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 STEAP1Q9UHE8 339 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 PCOLCE2Q9UKZ9 415 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 MOKQ9UQ07 419 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 ETV7Q9Y603 341 aa6.84□□□□□ -1.31
SMARCC1-202ENST00000425518 HEATR5AQ86XA9 2040 aa6.84□□□□□ -1.32
SMARCC1-202ENST00000425518 SDK1Q7Z5N4 2213 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 A0A1W2PQF6 199 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 GGT3PA6NGU5 568 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 ATP6V1G2-DDX39BF2Z307 99 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 IGF2P01344 180 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 APOC3P02656 99 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 CSN2P05814 226 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 RNH1P13489 461 aaKnown RBP6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 GABRA1P14867 456 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 PPP3CBP16298 524 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 ZP3P21754 424 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 PRSS3P35030 304 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 ARHGDIBP52566 201 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 IL10RAQ13651 578 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF74Q16587 644 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 C2orf76Q3KRA6 126 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 ARHGAP40Q5TG30 622 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 FAM109BQ6ICB4 259 aaPredicted RBP6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 TSSK4Q6SA08 328 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms