RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PEX12O00623 359 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 KLF4O43474 513 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 AMY2AP04746 511 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 OR8G3PP0DMU2 310 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 HIST1H1CP16403 213 aaKnown RBP10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 NME2P22392 152 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 DHRS2Q13268 280 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 CCINQ13939 588 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 TRAM1Q15629 374 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 DECR1Q16698 335 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 STAC2Q6ZMT1 411 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 NUDT18Q6ZVK8 323 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 KCNRGQ8N5I3 272 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 ZNF511Q8NB15 262 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 NKD1Q969G9 470 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 HAVCR1Q96D42 359 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 NMNAT3Q96T66 252 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 GGACTQ9BVM4 153 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 PRO1933Q9H354 126 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 ACKR4Q9NPB9 350 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 KLHL28Q9NXS3 571 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 AHSPQ9NZD4 102 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 C17orf113A0A1B0GUU1 675 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 ZNF879B4DU55 563 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 TMEM189-UBE2V1I3L0A0 370 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 HOXC4P09017 264 aaPredicted RBP10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 SNRPNP63162 240 aaKnown RBP10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 PRAMEF17Q5VTA0 474 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 OR10K2Q6IF99 312 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 SLC43A2Q8N370 569 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 NUP43Q8NFH3 380 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 HIST1H2BAQ96A08 127 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 PLD4Q96BZ4 506 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 PHYHIPLQ96FC7 376 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 PTCHD1Q96NR3 888 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 FOXN4Q96NZ1 517 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 INSM2Q96T92 566 aaPredicted RBP10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 MARCH5Q9NX47 278 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 NCDNQ9UBB6 729 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 GTF2A1LQ9UNN4 478 aa10.3□□□□□ -0.76
SEC61A1-202ENST00000424880 A0A0D9SG52 128 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 C9orf170A2RU37 121 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 LEFTY1O75610 366 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 CD53P19397 219 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 AK4P27144 223 aaPredicted RBP10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 AIMP2Q13155 320 aaKnown RBP10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 ZNF627Q7L945 461 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 INO80EQ8NBZ0 244 aaPredicted RBP10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 OR1J4Q8NGS1 313 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 AKR7LQ8NHP1 331 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 TMEM239Q8WW34 195 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 SLC39A7Q92504 469 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 FGF13Q92913 245 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 SLC35A4Q96G79 324 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 CAMK1GQ96NX5 476 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 PRSS27Q9BQR3 290 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 CMC2Q9NRP2 79 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 MED17Q9NVC6 651 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 SLC27A6Q9Y2P4 619 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 LOC390937A0A1W2PQ73 354 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 SULT2B1O00204 365 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 CD34P28906 385 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 TAS2R43P59537 309 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 MPPED2Q15777 294 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 SLC22A6Q4U2R8 563 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 C22orf39Q6P5X5 142 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 FAM111BQ6SJ93 734 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 OVCH1Q7RTY7 1134 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 KRT77Q7Z794 578 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 CACUL1Q86Y37 369 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 OR10H5Q8NGA6 315 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 OR4K14Q8NGD5 310 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 OR5AP2Q8NGF4 316 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 STOML3Q8TAV4 291 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 MARS2Q96GW9 593 aaKnown RBP10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 HSPA12BQ96MM6 686 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 MS4A8Q9BY19 250 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 RHOFQ9HBH0 211 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 TBC1D3DA0A087WVF3 549 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 TBC1D3IA0A087WXS9 549 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 TBC1D3EA0A087X179 549 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 TBC1D3KA0A087X1G2 549 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 A0A1W2PR48 441 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 FITM1A5D6W6 292 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 TBC1D3BA6NDS4 549 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 C5orf51A6NDU8 294 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 TBC1D3FA6NER0 549 aaPredicted RBP10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 TBC1D3LB9A6J9 549 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 SOX1O00570 391 aaPredicted RBP10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 ZNF749O43361 778 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 GLSO94925 669 aaPredicted RBP10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 TBC1D3HP0C7X1 549 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 AKR1C4P17516 323 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 SLC11A1P49279 550 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 PRKXP51817 358 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 SQSTM1Q13501 440 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 INPP5JQ15735 1006 aaPredicted RBP10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 TBC1D3GQ6DHY5 549 aa10.29□□□□□ -0.76
SEC61A1-202ENST00000424880 TBC1D3CQ6IPX1 549 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms