RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.83□□□□□ -0.2
C9orf3-204ENST00000424143 OR5M1Q8NGP8 315 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 OR14C36Q8NHC7 312 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 PHOSPHO2Q8TCD6 241 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 ZPLD1Q8TCW7 415 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 ZDHHC1Q8WTX9 485 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 ASB17Q8WXJ9 295 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 FAM3CQ92520 227 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 C4orf45Q96LM5 186 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 Q96M85 177 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 EDEM2Q9BV94 578 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 POTEKPQ9BYX7 375 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 B3GNT4Q9C0J1 378 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 MFFQ9GZY8 342 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 ZDHHC4Q9NPG8 344 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 EPHA6Q9UF33 1036 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 ERVK-19Q9WJR5 959 aa13.83□□□□□ -0.2
C9orf3-204ENST00000424143 A0A1B0GTI1 187 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 TMEM72A0PK05 275 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 ZNF860A6NHJ4 632 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 TMEM200CA6NKL6 621 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 DOK2O60496 412 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 WNT11O96014 354 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 SKP1P63208 163 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 FNDC7Q5VTL7 733 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 UQCC3Q6UW78 93 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 ALKAL2Q6UX46 152 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 KCNRGQ8N5I3 272 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 ZNF614Q8N883 585 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 RCBTB1Q8NDN9 531 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 PXT1Q8NFP0 134 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 PTX4Q96A99 478 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 MRPS24Q96EL2 167 aaKnown RBP13.82□□□□□ -0.2
C9orf3-204ENST00000424143 CDV3Q9UKY7 258 aaKnown RBP13.82□□□□□ -0.2
C9orf3-204ENST00000424143 KLHDC2Q9Y2U9 406 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 EML5Q05BV3 1969 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 OR6C74A6NCV1 312 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 ATP6V1G2-DDX39BF2Z307 99 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 GOSR2O14653 212 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 RENP00797 406 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 RAB3AP20336 220 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 FUT7Q11130 342 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 ZMYND11Q15326 602 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 RAB11BQ15907 218 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 C2orf68Q2NKX9 166 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 ALG10Q5BKT4 473 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 COL13A1Q5TAT6 717 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-204ENST00000424143 STEAP1BQ6NZ63 245 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 NPSR1Q6W5P4 371 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 MAMSTRQ6ZN01 415 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 TMEM17Q86X19 198 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 C12orf45Q8N5I9 185 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-204ENST00000424143 ZNF511Q8NB15 262 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 OR52B4Q8NGK2 314 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 TNFAIP8L1Q8WVP5 186 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 RIT1Q92963 219 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 GABRG3Q99928 467 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 MMP25Q9NPA2 562 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 IFT46Q9NQC8 304 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 LAMP5Q9UJQ1 280 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 PLEKHA6Q9Y2H5 1048 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 KCNK7Q9Y2U2 307 aa13.82□□□□□ -0.2
C9orf3-204ENST00000424143 TRAV8-7A0A075B6U6 113 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 FXYD6-FXYD2A0A087WZ82 144 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 MEGF11A6BM72 1044 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 ELOA3DA6NLF2 546 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-204ENST00000424143 CD74P04233 296 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 RLN1P04808 185 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 H2AFB1P0C5Y9 115 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 CT45A8P0DMV1 189 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 CT45A9P0DMV2 189 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 GTF2F2P13984 249 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 KIR2DL1P43626 348 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-204ENST00000424143 GPR3P46089 330 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 MAZP56270 477 aaKnown RBP13.81□□□□□ -0.2
C9orf3-204ENST00000424143 CTXN1P60606 82 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 YPEL5P62699 121 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 ITPRIPL2Q3MIP1 535 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 ELOA3BQ3SY89 546 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 CT45A2Q5DJT8 189 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 ENPP7Q6UWV6 458 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 DGAT2L6Q6ZPD8 337 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 PRSS41Q7RTY9 318 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 CCDC36Q8IYA8 594 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 PM20D2Q8IYS1 436 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 ZNF676Q8N7Q3 588 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 ELOA3Q8NG57 546 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 OR5T3Q8NGG3 340 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 FXYD6Q9H0Q3 95 aa13.81□□□□□ -0.2
C9orf3-204ENST00000424143 GPN3Q9UHW5 284 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-204ENST00000424143 MRPS33Q9Y291 106 aaKnown RBP13.81□□□□□ -0.2
C9orf3-204ENST00000424143 TMEM272A0A1B0GTI8 110 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 SYNDIG1LA6NDD5 238 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 OR5K4A6NMS3 321 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 A8MUA0 341 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 NUDT21O43809 227 aaKnown RBP13.8□□□□□ -0.2
C9orf3-204ENST00000424143 RASGRP1O95267 797 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 TMIGD3P0DMS9 266 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-204ENST00000424143 RNH1P13489 461 aaKnown RBP13.8□□□□□ -0.2
C9orf3-204ENST00000424143 FSTP19883 344 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms