RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 CACNG2Q9Y698 323 aa14.2□□□□□ -0.14
CHCHD3-202ENST00000423635 IGKV1D-42A0A075B6H8 117 aa14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 A0A087WUJ7 227 aa14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 PATE4P0C8F1 98 aa14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 FAM157BP0CG42 384 aa14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 ATP4BP51164 291 aa14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 HOXC5Q00444 222 aa14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 KLF17Q5JT82 389 aaPredicted RBP14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 BCL6BQ8N143 479 aaPredicted RBP14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 PAQR4Q8N4S7 273 aaPredicted RBP14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 ZNF781Q8N8C0 355 aa14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 SLC30A7Q8NEW0 376 aa14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 OR6N1Q8NGY5 312 aa14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 SLC25A28Q96A46 364 aa14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 ZNF48Q96MX3 618 aaPredicted RBP14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 OR52E6Q96RD3 313 aa14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 GAL3ST1Q99999 423 aa14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 SAP30LQ9HAJ7 183 aa14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 KLHL14Q9P2G3 628 aa14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 POLR3KQ9Y2Y1 108 aaPredicted RBP14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 MMP24Q9Y5R2 645 aa14.19□□□□□ -0.14
CHCHD3-202ENST00000423635 ZNF726A6NNF4 738 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 ITM2AO43736 263 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 SPAG7O75391 227 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 FOXH1O75593 365 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 SNAP29O95721 258 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 BCHEP06276 602 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 MYZAPP0CAP1 466 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 LBPP18428 481 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 CBLP22681 906 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 IL12AP29459 219 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 UCP2P55851 309 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 UFM1P61960 85 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 RBBP4Q09028 425 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 SLC9A3R2Q15599 337 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 FAM209AQ5JX71 171 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 SLC22A24Q8N4F4 322 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 EIF1ADQ8N9N8 165 aaKnown RBP14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 SCAIQ8N9R8 606 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 ELMOD3Q96FG2 381 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 TCF7L2Q9NQB0 619 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 MMP26Q9NRE1 261 aa14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 PURGQ9UJV8 347 aaKnown RBP14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.18□□□□□ -0.14
CHCHD3-202ENST00000423635 TPD52L2O43399 206 aaKnown RBP14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 ZNF500O60304 480 aaPredicted RBP14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 IGHV3-13P01766 116 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 MT-ND5P03915 603 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 ETFAP13804 333 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 NQO1P15559 274 aaKnown RBP14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 ETV4P43268 484 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 DSTNP60981 165 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 ERVS71-1P61550 626 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 PDCD4Q53EL6 469 aaKnown RBP14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 ARMCX4Q5H9R4 360 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 RPS26P11Q5JNZ5 115 aaPredicted RBP14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 OGFOD2Q6N063 350 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 PXKQ7Z7A4 578 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 GLB1L3Q8NCI6 653 aaPredicted RBP14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 ST7LQ8TDW4 575 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 DNAJA4Q8WW22 397 aaPredicted RBP14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 CCL17Q92583 94 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 TMEM19Q96HH6 336 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 BCL2L14Q9BZR8 327 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 C1orf198Q9H425 327 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 SLC6A13Q9NSD5 602 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 THUMPD1Q9NXG2 353 aaKnown RBP14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 RPS6KB2Q9UBS0 482 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 AUP1Q9Y679 476 aa14.17□□□□□ -0.14
CHCHD3-202ENST00000423635 TLDC2A0PJX2 215 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 RFXANKO14593 260 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 ENTPD5O75356 428 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 UBOX5O94941 541 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 MFN2O95140 757 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 BGLAPP02818 100 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 LCKP06239 509 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 OR8G3PP0DMU2 310 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 CCL2P13500 99 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 MDKP21741 143 aaPredicted RBP14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 CRATP43155 626 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 RPL14P50914 215 aaKnown RBP14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 NME5P56597 212 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 SLC3A1Q07837 685 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 PUDPQ08623 228 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 ZNF154Q13106 437 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 TSTQ16762 297 aaKnown RBP14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 LEG1Q6P5S2 330 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 WDR88Q6ZMY6 472 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 NUDCD3Q8IVD9 361 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 GTF3AQ92664 365 aaKnown RBP14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 TMEM54Q969K7 222 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 TRIM44Q96DX7 344 aaPredicted RBP14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 RHOXF2Q9BQY4 288 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 C20orf27Q9GZN8 174 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 CACYBPQ9HB71 228 aaKnown RBP14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 CDH20Q9HBT6 801 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 BCL2L10Q9HD36 194 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 MRPL39Q9NYK5 338 aaKnown RBP14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 RAP2CQ9Y3L5 183 aa14.16□□□□□ -0.14
CHCHD3-202ENST00000423635 GPR45Q9Y5Y3 372 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms