RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 OR5K1Q8NHB7 308 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 FANK1Q8TC84 345 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 ASB10Q8WXI3 467 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 ZNF566Q969W8 418 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 NRBF2Q96F24 287 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 CENPNQ96H22 339 aaPredicted RBP8.17□□□□□ -1.1
PDGFC-202ENST00000422544 SLC25A44Q96H78 314 aaPredicted RBP8.17□□□□□ -1.1
PDGFC-202ENST00000422544 LRR1Q96L50 414 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 SAMD8Q96LT4 415 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 ADAD1Q96M93 576 aaKnown RBP8.17□□□□□ -1.1
PDGFC-202ENST00000422544 ALKBH3Q96Q83 286 aaPredicted RBP8.17□□□□□ -1.1
PDGFC-202ENST00000422544 TSPAN32Q96QS1 320 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 NIPSNAP1Q9BPW8 284 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 KATNB1Q9BVA0 655 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 HDHD5Q9BXW7 423 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 DGCR6LQ9BY27 220 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 POLDIP3Q9BY77 421 aaKnown RBP8.17□□□□□ -1.1
PDGFC-202ENST00000422544 LINC00470Q9BZP3 86 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 NDEL1Q9GZM8 345 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 TXNIPQ9H3M7 391 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 EGLN3Q9H6Z9 239 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 MALT1Q9UDY8 824 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 GPR52Q9Y2T5 361 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 ADAM18Q9Y3Q7 739 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 IER3IP1Q9Y5U9 82 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 FREM1Q5H8C1 2179 aa8.17□□□□□ -1.1
PDGFC-202ENST00000422544 CIB4A0PJX0 185 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 ARRDC5A6NEK1 342 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 TUBAL3A6NHL2 446 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 NPIPB13A6NJU9 1138 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 NPIPB4C9JG80 1138 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 ZNF587BE7ETH6 402 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 G3V2T6 193 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 PDLIM1O00151 329 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 TRMUO75648 421 aaKnown RBP8.16□□□□□ -1.1
PDGFC-202ENST00000422544 SOX14O95416 240 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 PPP1R3DO95685 299 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 IGHG1P01857 330 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 IGHMP01871 453 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 ITGA5P08648 1049 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 PGA4P0DJD7 388 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 PGA3P0DJD8 388 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 ACADSP16219 412 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 ZNF23P17027 643 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 IGFBP2P18065 325 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 PSMB1P20618 241 aaKnown RBP8.16□□□□□ -1.1
PDGFC-202ENST00000422544 GSTM3P21266 225 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 IL32P24001 234 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 MPGP29372 298 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 SLC6A6P31641 620 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 CCKARP32238 428 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 ACVR1BP36896 505 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 KIR2DL3P43628 341 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 CSNK1A1P48729 337 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 PCYT1AP49585 367 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 CLRN1P58418 232 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 SORDQ00796 357 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 ROR2Q01974 943 aaKnown RBP8.16□□□□□ -1.1
PDGFC-202ENST00000422544 CACNA1CQ13936 2221 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 CLEC12AQ5QGZ9 265 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 LRFN4Q6PJG9 635 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 DPY19L2P2Q6ZN68 376 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 ZNF620Q6ZNG0 422 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 RASSF6Q6ZTQ3 369 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 C22orf34Q6ZV56 151 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 BHLHA15Q7RTS1 189 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-202ENST00000422544 ZDHHC13Q8IUH4 622 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 ANKHD1Q8IWZ3 2542 aaKnown RBP8.16□□□□□ -1.1
PDGFC-202ENST00000422544 DMRTC2Q8IXT2 367 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-202ENST00000422544 CLDN22Q8N7P3 220 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 ARIH2OSQ8N7S6 290 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 ATG16L2Q8NAA4 619 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 SYT14Q8NB59 555 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 ICA1LQ8NDH6 482 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 HDAC2Q92769 488 aaKnown RBP8.16□□□□□ -1.1
PDGFC-202ENST00000422544 STMN2Q93045 179 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 KISS1RQ969F8 398 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-202ENST00000422544 TMEM54Q969K7 222 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 S100PBPQ96BU1 408 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 ZNF837Q96EG3 531 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-202ENST00000422544 Q96M85 177 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 WFIKKN1Q96NZ8 548 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 SPOCK3Q9BQ16 436 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 IFT27Q9BW83 186 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 MRPL13Q9BYD1 178 aaKnown RBP8.16□□□□□ -1.1
PDGFC-202ENST00000422544 ACTR6Q9GZN1 396 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 OR52D1Q9H346 318 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 ZNF556Q9HAH1 456 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 CRLF2Q9HC73 371 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 GPR35Q9HC97 309 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 NRIP3Q9NQ35 241 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 GLTPQ9NZD2 209 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 GRHPRQ9UBQ7 328 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 CDH10Q9Y6N8 788 aa8.16□□□□□ -1.1
PDGFC-202ENST00000422544 TEX13CA0A0J9YWL9 993 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 A6NIZ1 184 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 SAC3D1A6NKF1 404 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 RPL36A-HNRNPH2H7BZ11 118 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 SOCS2O14508 198 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 ARHGEF9O43307 516 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms