RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 C2orf16Q68DN1 1984 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 UPK3AO75631 287 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 TSPAN9O75954 239 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 KLF8O95600 359 aaPredicted RBP13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 CD1AP06126 327 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 GRM7Q14831 915 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 BCORP1Q8N888 145 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 C16orf52Q8NHV5 167 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 CCDC74AQ96AQ1 378 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 DGAT2Q96PD7 388 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 G6PC3Q9BUM1 346 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 EXO5Q9H790 373 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 OPN4Q9UHM6 478 aa13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 SPTBN5Q9NRC6 3674 aaKnown RBP13.8□□□□□ -0.2
SEMA3B-203ENST00000419007 A0A0J9YY10 115 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 OR2M5A3KFT3 312 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 SNRPGP15A8MWD9 76 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 CTNSO60931 367 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 CD14P08571 375 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 HOXD4P09016 255 aaPredicted RBP13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 ST6GAL1P15907 406 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 CCKBRP32239 447 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 ZMYND11Q15326 602 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 TMED4Q7Z7H5 227 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 MUC20Q8N307 709 aaPredicted RBP13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 RNF166Q96A37 237 aaPredicted RBP13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 LMF2Q9BU23 707 aaKnown RBP13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 MED11Q9P086 117 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 EFCAB7A8K855 629 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 F5H5P2 479 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 OR2A4O95047 310 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 HIST1H2ABP04908 130 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 C1orf61Q13536 156 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 ARMC6Q6NXE6 501 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 CBLN3Q6UW01 205 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 LRRN1Q6UXK5 716 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 SLC35D2Q76EJ3 337 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 HIST3H2AQ7L7L0 130 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 AVL9Q8NBF6 648 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 OR2G2Q8NGZ5 317 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 RSC1A1Q92681 617 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 HIST1H2ACQ93077 130 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 OR2A7Q96R45 310 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 SYT4Q9H2B2 425 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 PRDM9Q9NQV7 894 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 FBXL3Q9UKT7 428 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 PCOLCE2Q9UKZ9 415 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 IGKV1D-42A0A075B6H8 117 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 A6NCN8 305 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 APBB3O95704 486 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 IL5P05113 134 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 CELA2BP08218 269 aaPredicted RBP13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 CT45A8P0DMV1 189 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 CT45A9P0DMV2 189 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 SORDQ00796 357 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 ZNF141Q15928 474 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 CT45A2Q5DJT8 189 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 OR7E24Q6IFN5 339 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 ST8SIA4Q92187 359 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 CHST6Q9GZX3 395 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 MYEF2Q9P2K5 600 aaKnown RBP13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 ETV7Q9Y603 341 aa13.79□□□□□ -0.2
SEMA3B-203ENST00000419007 MFSD2BA6NFX1 497 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 C11orf98E9PRG8 122 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 OIP5O43482 229 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 AKR7A3O95154 331 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 ZP3P21754 424 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 POU3F4P49335 361 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 ARSKQ6UWY0 536 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 GSG1LQ6UXU4 331 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 LRRTM1Q86UE6 522 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 OR2AK2Q8NG84 335 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 ZNF563Q8TA94 476 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 GPR148Q8TDV2 347 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 DUSP19Q8WTR2 217 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 REG4Q9BYZ8 158 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 RWDD3Q9Y3V2 267 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 TNRC18O15417 2968 aaPredicted RBP13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 H7C417 338 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 XRCC3O43542 346 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 CD3DP04234 171 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 GMFBP60983 142 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 ZNF684Q5T5D7 378 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 RGS7BPQ6MZT1 257 aaPredicted RBP13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 SLC37A2Q8TED4 501 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 ATOH1Q92858 354 aaPredicted RBP13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 MRI1Q9BV20 369 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 PRTFDC1Q9NRG1 225 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 OBP2AQ9NY56 170 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 MTFP1Q9UDX5 166 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 STEAP1Q9UHE8 339 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 FBXL2Q9UKC9 423 aa13.78□□□□□ -0.2
SEMA3B-203ENST00000419007 DOCK8Q8NF50 2099 aa13.77□□□□□ -0.2
SEMA3B-203ENST00000419007 GGT3PA6NGU5 568 aa13.77□□□□□ -0.2
SEMA3B-203ENST00000419007 PRAMEF2O60811 474 aa13.77□□□□□ -0.2
SEMA3B-203ENST00000419007 PLGP00747 810 aaPredicted RBP13.77□□□□□ -0.2
SEMA3B-203ENST00000419007 SDHAP31040 664 aa13.77□□□□□ -0.2
SEMA3B-203ENST00000419007 CD226Q15762 336 aa13.77□□□□□ -0.2
SEMA3B-203ENST00000419007 CSRP2Q16527 193 aa13.77□□□□□ -0.2
SEMA3B-203ENST00000419007 ZNF74Q16587 644 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms