RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.51□□□□□ -1.21
TRIM48-201ENST00000417545 FAPQ12884 760 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 PTGES3Q15185 160 aaKnown RBP7.51□□□□□ -1.21
TRIM48-201ENST00000417545 SNAPC1Q16533 368 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 SLC25A35Q3KQZ1 300 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 KLHL24Q6TFL4 600 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 BEND4Q6ZU67 534 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 SEM1Q6ZVN7 128 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 NUFIP2Q7Z417 695 aaKnown RBP7.51□□□□□ -1.21
TRIM48-201ENST00000417545 MRGPRGQ86SM5 289 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 MARVELD2Q8N4S9 558 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 ARIH2OSQ8N7S6 290 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 SYT14Q8NB59 555 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 NAXEQ8NCW5 288 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 SDR9C7Q8NEX9 313 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 OR52E2Q8NGJ4 325 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 OR8D4Q8NGM9 314 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 OR4K13Q8NH42 304 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 OR6X1Q8NH79 312 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 FAM81AQ8TBF8 368 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 TXNDC15Q96J42 360 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 ALKBH3Q96Q83 286 aaPredicted RBP7.51□□□□□ -1.21
TRIM48-201ENST00000417545 OR2M2Q96R28 347 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 GPX7Q96SL4 187 aaPredicted RBP7.51□□□□□ -1.21
TRIM48-201ENST00000417545 SLC29A1Q99808 456 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 APOL4Q9BPW4 351 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 ALG12Q9BV10 488 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 ENKD1Q9H0I2 346 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 OPN3Q9H1Y3 402 aaPredicted RBP7.51□□□□□ -1.21
TRIM48-201ENST00000417545 RASSF4Q9H2L5 321 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 TOR3AQ9H497 397 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 NRIP3Q9NQ35 241 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 TVP23BQ9NYZ1 205 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 H2AFY2Q9P0M6 372 aaPredicted RBP7.51□□□□□ -1.21
TRIM48-201ENST00000417545 REV1Q9UBZ9 1251 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 IGSF10Q6WRI0 2623 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 ESPL1Q14674 2120 aa7.51□□□□□ -1.21
TRIM48-201ENST00000417545 A0A1W2PPL8 197 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 CENPBD1B2RD01 187 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 PRR23D1E9PI22 279 aaPredicted RBP7.5□□□□□ -1.21
TRIM48-201ENST00000417545 LCE2BO14633 110 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 MSTNO14793 375 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 ZG16O60844 167 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 TRMUO75648 421 aaKnown RBP7.5□□□□□ -1.21
TRIM48-201ENST00000417545 SNAP29O95721 258 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 TSPAN19P0C672 248 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 PRR23D2P0DMB1 279 aaPredicted RBP7.5□□□□□ -1.21
TRIM48-201ENST00000417545 CD8BP10966 210 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 HIST1H1CP16403 213 aaKnown RBP7.5□□□□□ -1.21
TRIM48-201ENST00000417545 IL32P24001 234 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 KIR2DL2P43627 348 aaPredicted RBP7.5□□□□□ -1.21
TRIM48-201ENST00000417545 OR3A2P47893 321 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 ASCL1P50553 236 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 FXYD6P3P58550 94 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 RPS7P62081 194 aaKnown RBP7.5□□□□□ -1.21
TRIM48-201ENST00000417545 TGFBR3Q03167 851 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 TMEM236Q5W0B7 351 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 TTC23Q5W5X9 447 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 FBXW9Q5XUX1 488 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 XKRXQ6PP77 449 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 IZUMO2Q6UXV1 221 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 BTLAQ7Z6A9 289 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 DEPDC4Q8N2C3 294 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 ZNF808Q8N4W9 903 aaPredicted RBP7.5□□□□□ -1.21
TRIM48-201ENST00000417545 DHRSXQ8N5I4 330 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 SETD9Q8NE22 299 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 OR4Q3Q8NH05 313 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 RBM24Q9BX46 236 aaKnown RBP7.5□□□□□ -1.21
TRIM48-201ENST00000417545 GABARAPL3Q9BY60 117 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 SLC25A19Q9HC21 320 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 KCNJ16Q9NPI9 418 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 GLTPQ9NZD2 209 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 PRSS50Q9UI38 385 aa7.5□□□□□ -1.21
TRIM48-201ENST00000417545 TMEFF2Q9UIK5 374 aaPredicted RBP7.5□□□□□ -1.21
TRIM48-201ENST00000417545 PRSS37A4D1T9 235 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 BHLHE40O14503 412 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 ARPC3O15145 178 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 AHCYL1O43865 530 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 SLC16A7O60669 478 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 TNFSF13O75888 250 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 FARS2O95363 451 aaKnown RBP7.49□□□□□ -1.21
TRIM48-201ENST00000417545 HLA-DQA2P01906 255 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 QDPRP09417 244 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 CRABP1P29762 137 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 CAPZA2P47755 286 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 GIPRP48546 466 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 ADORA2A-AS1P86434 159 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 IL5RAQ01344 420 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 ROR2Q01974 943 aaKnown RBP7.49□□□□□ -1.21
TRIM48-201ENST00000417545 LGALS3BPQ08380 585 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 MESTQ5EB52 335 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 THEM4Q5T1C6 240 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 ARMC4Q5T2S8 1044 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 TSPO2Q5TGU0 170 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 C9orf135Q5VTT2 229 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 SLX4IPQ5VYV7 408 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 TFAP2EQ6VUC0 442 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 PTCHD4Q6ZW05 846 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 FAM122BQ7Z309 247 aa7.49□□□□□ -1.21
TRIM48-201ENST00000417545 LNX2Q8N448 690 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms