RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 ZNF311Q5JNZ3 666 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 AGAP6Q5VW22 663 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 TTC33Q6PID6 262 aaPredicted RBP18■□□□□ 0.47
PTPRU-203ENST00000415600 VRK2Q86Y07 508 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 C8orf59Q8N0T1 100 aaPredicted RBP18■□□□□ 0.47
PTPRU-203ENST00000415600 LILRB1Q8NHL6 650 aaPredicted RBP18■□□□□ 0.47
PTPRU-203ENST00000415600 SLC35B4Q969S0 331 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 HS6ST2Q96MM7 605 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 MRPS26Q9BYN8 205 aaKnown RBP18■□□□□ 0.47
PTPRU-203ENST00000415600 GRIP2Q9C0E4 1043 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 KRT84Q9NSB2 600 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 FLVCR1Q9Y5Y0 555 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 TLN2Q9Y4G6 2542 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 OVOL3O00110 214 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 SOD3P08294 240 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 GKN3PP0CG01 181 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 IMPDH2P12268 514 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 EDNRAP25101 427 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 SLC17A1Q14916 467 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 SLC22A25Q6T423 547 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 KLHL24Q6TFL4 600 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 DEF8Q6ZN54 512 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 THAP5Q7Z6K1 395 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 RBM45Q8IUH3 476 aaKnown RBP18■□□□□ 0.47
PTPRU-203ENST00000415600 PIAS4Q8N2W9 510 aaPredicted RBP18■□□□□ 0.47
PTPRU-203ENST00000415600 CIARTQ8N365 385 aaPredicted RBP18■□□□□ 0.47
PTPRU-203ENST00000415600 POMGNT2Q8NAT1 580 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 OR52N5Q8NH56 324 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 OR52J3Q8NH60 311 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 TMEM45BQ96B21 275 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 ARHGDIGQ99819 225 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 WFDC6Q9BQY6 131 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 YTHDF1Q9BYJ9 559 aaKnown RBP18■□□□□ 0.47
PTPRU-203ENST00000415600 AMDHD2Q9Y303 409 aa18■□□□□ 0.47
PTPRU-203ENST00000415600 CADP27708 2225 aa17.99■□□□□ 0.47
PTPRU-203ENST00000415600 OR6C65A6NJZ3 312 aa17.99■□□□□ 0.47
PTPRU-203ENST00000415600 LIPT2A6NK58 231 aa17.99■□□□□ 0.47
PTPRU-203ENST00000415600 M0R3H8 397 aa17.99■□□□□ 0.47
PTPRU-203ENST00000415600 KRT33AO76009 404 aa17.99■□□□□ 0.47
PTPRU-203ENST00000415600 SMIM11AP58511 58 aa17.99■□□□□ 0.47
PTPRU-203ENST00000415600 OR7A5Q15622 319 aa17.99■□□□□ 0.47
PTPRU-203ENST00000415600 CLEC12BQ2HXU8 276 aa17.99■□□□□ 0.47
PTPRU-203ENST00000415600 TMEM225Q6GV28 225 aa17.99■□□□□ 0.47
PTPRU-203ENST00000415600 SEZ6L2Q6UXD5 910 aa17.99■□□□□ 0.47
PTPRU-203ENST00000415600 ZNF786Q8N393 782 aa17.99■□□□□ 0.47
PTPRU-203ENST00000415600 CSPG4Q6UVK1 2322 aa17.98■□□□□ 0.47
PTPRU-203ENST00000415600 CCNB2O95067 398 aa17.98■□□□□ 0.47
PTPRU-203ENST00000415600 H1F0P07305 194 aaKnown RBP17.98■□□□□ 0.47
PTPRU-203ENST00000415600 BMP4P12644 408 aa17.98■□□□□ 0.47
PTPRU-203ENST00000415600 PAX7P23759 505 aa17.98■□□□□ 0.47
PTPRU-203ENST00000415600 GTF2E2P29084 291 aaKnown RBP17.98■□□□□ 0.47
PTPRU-203ENST00000415600 IL1RL1Q01638 556 aa17.98■□□□□ 0.47
PTPRU-203ENST00000415600 ZNF691Q5VV52 312 aa17.98■□□□□ 0.47
PTPRU-203ENST00000415600 GPAT4Q86UL3 456 aa17.98■□□□□ 0.47
PTPRU-203ENST00000415600 OR9K2Q8NGE7 335 aa17.98■□□□□ 0.47
PTPRU-203ENST00000415600 ADAD1Q96M93 576 aaKnown RBP17.98■□□□□ 0.47
PTPRU-203ENST00000415600 FEVQ99581 238 aa17.98■□□□□ 0.47
PTPRU-203ENST00000415600 GABARAPL3Q9BY60 117 aa17.98■□□□□ 0.47
PTPRU-203ENST00000415600 RIBC2Q9H4K1 309 aa17.98■□□□□ 0.47
PTPRU-203ENST00000415600 FKRPQ9H9S5 495 aa17.98■□□□□ 0.47
PTPRU-203ENST00000415600 NMNAT1Q9HAN9 279 aaPredicted RBP17.98■□□□□ 0.47
PTPRU-203ENST00000415600 RPS6KB2Q9UBS0 482 aa17.98■□□□□ 0.47
PTPRU-203ENST00000415600 SLC13A4Q9UKG4 626 aa17.98■□□□□ 0.47
PTPRU-203ENST00000415600 A4GNTQ9UNA3 340 aa17.98■□□□□ 0.47
PTPRU-203ENST00000415600 SLC25A15Q9Y619 301 aa17.98■□□□□ 0.47
PTPRU-203ENST00000415600 ZC3H12DA2A288 527 aaKnown RBP17.97■□□□□ 0.47
PTPRU-203ENST00000415600 AQP7P3A6NL99 342 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 SHISA9B4DS77 424 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 E9PQ18 207 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 AHSA1O95433 338 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 WNT11O96014 354 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 MPGP29372 298 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 POLR2IP36954 125 aaKnown RBP17.97■□□□□ 0.47
PTPRU-203ENST00000415600 ACAA2P42765 397 aaKnown RBP17.97■□□□□ 0.47
PTPRU-203ENST00000415600 ZNF83P51522 516 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 GABRA6Q16445 453 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 AAED1Q7RTV5 226 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 DTX2Q86UW9 622 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 TSPAN14Q8NG11 270 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 OR6T1Q8NGN1 323 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 STK35Q8TDR2 534 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 NEUROG1Q92886 237 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 PRRC1Q96M27 445 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 NPAP1Q9NZP6 1156 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 RHCGQ9UBD6 479 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 POFUT2Q9Y2G5 429 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 CHST2Q9Y4C5 530 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 HSPE1-MOB4S4R3N1 261 aa17.97■□□□□ 0.47
PTPRU-203ENST00000415600 RAMP1O60894 148 aa17.96■□□□□ 0.47
PTPRU-203ENST00000415600 AKR7A3O95154 331 aa17.96■□□□□ 0.47
PTPRU-203ENST00000415600 CLPTM1O96005 669 aa17.96■□□□□ 0.47
PTPRU-203ENST00000415600 FUT4P22083 530 aa17.96■□□□□ 0.47
PTPRU-203ENST00000415600 CBLP22681 906 aa17.96■□□□□ 0.47
PTPRU-203ENST00000415600 CD40P25942 277 aa17.96■□□□□ 0.47
PTPRU-203ENST00000415600 PGGHGQ32M88 737 aa17.96■□□□□ 0.47
PTPRU-203ENST00000415600 C1orf140Q5VVS0 124 aa17.96■□□□□ 0.47
PTPRU-203ENST00000415600 FBXL14Q8N1E6 418 aa17.96■□□□□ 0.47
PTPRU-203ENST00000415600 SETD9Q8NE22 299 aa17.96■□□□□ 0.47
PTPRU-203ENST00000415600 PITX2Q99697 317 aa17.96■□□□□ 0.47
PTPRU-203ENST00000415600 TRAF4Q9BUZ4 470 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms