RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 ZNF74Q16587 644 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 NDUFAF6Q330K2 333 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 LIPNQ5VXI9 398 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 HIST3H2AQ7L7L0 130 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 SLC36A1Q7Z2H8 476 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 BCORP1Q8N888 145 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 HIST1H2ACQ93077 130 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 SEMA6CQ9H3T2 930 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 KCNK15Q9H427 330 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 CD93Q9NPY3 652 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 LRIT1Q9P2V4 623 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 MTFP1Q9UDX5 166 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 STEAP1Q9UHE8 339 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 MRM2Q9UI43 246 aaKnown RBP8.91□□□□□ -0.98
CD44-206ENST00000415148 HS3ST3A1Q9Y663 406 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 TMEM14AQ9Y6G1 99 aa8.91□□□□□ -0.98
CD44-206ENST00000415148 IGKV1D-42A0A075B6H8 117 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 UBE2QL1A1L167 161 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 ELOA3DA6NLF2 546 aaPredicted RBP8.9□□□□□ -0.98
CD44-206ENST00000415148 TMEM212A6NML5 194 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 H0YC42 278 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 CLDN4O14493 209 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 TOR1AO14656 332 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 ZNF254O75437 659 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 SERPINI2O75830 405 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 ABHD16AO95870 558 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 TNFP01375 233 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 GLULP15104 373 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 ADRA2CP18825 462 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 COL9A1P20849 921 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 LTBQ06643 244 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 FUT7Q11130 342 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 BIKQ13323 160 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 ELOA3BQ3SY89 546 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 OTPQ5XKR4 325 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 BIVMQ86UB2 503 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 ZNF227Q86WZ6 799 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 NAXDQ8IW45 347 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 RELL2Q8NC24 303 aaPredicted RBP8.9□□□□□ -0.98
CD44-206ENST00000415148 ELOA3Q8NG57 546 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 OR9A4Q8NGU2 314 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 OR4C3Q8NH37 302 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 MARC2Q969Z3 335 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 PNPLA2Q96AD5 504 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 CCDC74AQ96AQ1 378 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 SPACA7Q96KW9 195 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 Q96M85 177 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 DGAT2Q96PD7 388 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 COMMD4Q9H0A8 199 aa8.9□□□□□ -0.98
CD44-206ENST00000415148 MTIF3Q9H2K0 278 aaKnown RBP8.9□□□□□ -0.98
CD44-206ENST00000415148 TMEM72A0PK05 275 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 MEIS3P1A6NDR6 274 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 GRXCR1A8MXD5 290 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 BLOC1S5-TXNDC5H3BN57 136 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 B3GALNT1O75752 331 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 ASAH2BP0C7U1 165 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 MYOGP15173 224 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 CSRP1P21291 193 aaKnown RBP8.9□□□□□ -0.99
CD44-206ENST00000415148 ITPKBP27987 946 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 S100A11P31949 105 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 RASGEF1BQ0VAM2 473 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 MPPED2Q15777 294 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 ALG10Q5BKT4 473 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 COL13A1Q5TAT6 717 aaPredicted RBP8.9□□□□□ -0.99
CD44-206ENST00000415148 YOD1Q5VVQ6 348 aaPredicted RBP8.9□□□□□ -0.99
CD44-206ENST00000415148 FAM122CQ6P4D5 195 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 FDX2Q6P4F2 183 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 ANKRD16Q6P6B7 361 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 LRFN4Q6PJG9 635 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 TFAP2EQ6VUC0 442 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 TMUB2Q71RG4 321 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 ATG4DQ86TL0 474 aaPredicted RBP8.9□□□□□ -0.99
CD44-206ENST00000415148 ZNF511Q8NB15 262 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 CDCA3Q99618 268 aaPredicted RBP8.9□□□□□ -0.99
CD44-206ENST00000415148 CHST6Q9GZX3 395 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 SLC17A5Q9NRA2 495 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 KLHDC2Q9Y2U9 406 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 OR10H1Q9Y4A9 318 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 SESN1Q9Y6P5 492 aa8.9□□□□□ -0.99
CD44-206ENST00000415148 NUP210LQ5VU65 1888 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 TMEM272A0A1B0GTI8 110 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 OR4C45A6NMZ5 311 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 TTLL8A6PVC2 850 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 A8MXK9 166 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 SRPX2O60687 465 aaPredicted RBP8.89□□□□□ -0.99
CD44-206ENST00000415148 RPP14O95059 124 aaKnown RBP8.89□□□□□ -0.99
CD44-206ENST00000415148 ANXA2P07355 339 aaKnown RBP8.89□□□□□ -0.99
CD44-206ENST00000415148 OR8G3PP0DMU2 310 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 ZNF35P13682 527 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 AKT2P31751 481 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 AQP2P41181 271 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 CTXN1P60606 82 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 SEC61A1P61619 476 aaKnown RBP8.89□□□□□ -0.99
CD44-206ENST00000415148 GUCA2AQ02747 115 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 CCINQ13939 588 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 GRM7Q14831 915 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 PRTGQ2VWP7 1150 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 FNDC7Q5VTL7 733 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 PARM1Q6UWI2 310 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 OR1S1Q8NH92 325 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms