RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 TNFRSF12AQ9NP84 129 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 DYNLRB1Q9NP97 96 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 HSPB11Q9Y547 144 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 GON4LQ3T8J9 2241 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 FAM230AA0A1W2PPH8 454 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 FIGNL2A6NMB9 653 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 M0R082 166 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 ABHD16AO95870 558 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 ARRB2P32121 409 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF133P52736 654 aaPredicted RBP10.95□□□□□ -0.66
PTPRF-205ENST00000414879 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.95□□□□□ -0.66
PTPRF-205ENST00000414879 STOML3Q8TAV4 291 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 OR52A1Q9UKL2 312 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 TIMM10BQ9Y5J6 103 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 LRP5LA4QPB2 252 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 RAD1O60671 282 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 IFNA1P01562 189 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 SFTPBP07988 381 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 PTH2RP49190 550 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 METAP1P53582 386 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 PCBP4P57723 403 aaKnown RBP10.95□□□□□ -0.66
PTPRF-205ENST00000414879 SLC35A2P78381 396 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 SSPNQ14714 243 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 TCTN1Q2MV58 587 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 RHBDD2Q6NTF9 364 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 STX12Q86Y82 276 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 TCEAL3Q969E4 200 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF471Q9BX82 626 aaPredicted RBP10.95□□□□□ -0.66
PTPRF-205ENST00000414879 SLC38A1Q9H2H9 487 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 OPA3Q9H6K4 179 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 SPACA1Q9HBV2 294 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 FAIMQ9NVQ4 179 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF224Q9NZL3 707 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 A0A1B0GTQ1 180 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 CYB5BO43169 146 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 SLC34A2O95436 690 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 SMN1Q16637 294 aaKnown RBP10.95□□□□□ -0.66
PTPRF-205ENST00000414879 OR2A2Q6IF42 318 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 WDR5BQ86VZ2 330 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 TEX19Q8NA77 164 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 TMEM106AQ96A25 262 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 Q96M85 177 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 NUDT22Q9BRQ3 303 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 NICN1Q9BSH3 213 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF700Q9H0M5 742 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 NXF5Q9H1B4 397 aaKnown RBP10.95□□□□□ -0.66
PTPRF-205ENST00000414879 DUSP21Q9H596 190 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 OBP2BQ9NPH6 170 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 EXOSC3Q9NQT5 275 aaKnown RBP10.95□□□□□ -0.66
PTPRF-205ENST00000414879 TXNL4BQ9NX01 149 aaKnown RBP10.95□□□□□ -0.66
PTPRF-205ENST00000414879 RAB22AQ9UL26 194 aa10.95□□□□□ -0.66
PTPRF-205ENST00000414879 MYO7AQ13402 2215 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 B4GAT1O43505 415 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 BMP1P13497 986 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 APEHP13798 732 aaKnown RBP10.94□□□□□ -0.66
PTPRF-205ENST00000414879 SRPXP78539 464 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 MEP1BQ16820 701 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 OR2G6Q5TZ20 316 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 TRAPPC6BQ86SZ2 158 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 MEX3DQ86XN8 651 aaKnown RBP10.94□□□□□ -0.66
PTPRF-205ENST00000414879 CPEB3Q8NE35 698 aaKnown RBP10.94□□□□□ -0.66
PTPRF-205ENST00000414879 PSMF1Q92530 271 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 PAPOLGQ9BWT3 736 aaKnown RBP10.94□□□□□ -0.66
PTPRF-205ENST00000414879 TMEM59Q9BXS4 323 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 COQ3Q9NZJ6 369 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 NLKQ9UBE8 527 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF236Q9UL36 1845 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF891A8MT65 544 aaPredicted RBP10.94□□□□□ -0.66
PTPRF-205ENST00000414879 ICOSLGO75144 302 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 ACTL6BO94805 426 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 AKR1C2P52895 323 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 ARSKQ6UWY0 536 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 LINC01555Q8NAE3 123 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 OR51A2Q8NGJ7 313 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 OR6F1Q8NGZ6 308 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 PIGCQ92535 297 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 GPR87Q9BY21 358 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 NOX4Q9NPH5 578 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 TRAV17A0A0B4J275 112 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 E9PI62 339 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 TK1P04183 234 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 CALCBP10092 127 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 CHRNB1P11230 501 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 TNFSF8P32971 234 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 MTCP1P56278 107 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 FAM76BQ5HYJ3 339 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 COL13A1Q5TAT6 717 aaPredicted RBP10.94□□□□□ -0.66
PTPRF-205ENST00000414879 ZNF611Q8N823 705 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 C22orf15Q8WYQ4 148 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 FAM173AQ9BQD7 235 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 NRSN2Q9GZP1 204 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 SPNS1Q9H2V7 528 aa10.94□□□□□ -0.66
PTPRF-205ENST00000414879 TP63Q9H3D4 680 aaPredicted RBP10.94□□□□□ -0.66
PTPRF-205ENST00000414879 MCRIP1C9JLW8 97 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 PPM1DO15297 605 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 STK17BO94768 372 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 SERPINE2P07093 398 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 POLR2IP36954 125 aaKnown RBP10.93□□□□□ -0.66
PTPRF-205ENST00000414879 DNAAF1Q8NEP3 725 aa10.93□□□□□ -0.66
PTPRF-205ENST00000414879 OR52H1Q8NGJ2 320 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms