RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 NANOGQ9H9S0 305 aa4.33□□□□□ -1.72
VPS41-205ENST00000414632 CACYBPQ9HB71 228 aaKnown RBP4.33□□□□□ -1.72
VPS41-205ENST00000414632 CHST11Q9NPF2 352 aa4.33□□□□□ -1.72
VPS41-205ENST00000414632 ACER3Q9NUN7 267 aa4.33□□□□□ -1.72
VPS41-205ENST00000414632 PPP1R14DQ9NXH3 145 aa4.33□□□□□ -1.72
VPS41-205ENST00000414632 CALML5Q9NZT1 146 aa4.33□□□□□ -1.72
VPS41-205ENST00000414632 KLHL13Q9P2N7 655 aa4.33□□□□□ -1.72
VPS41-205ENST00000414632 OSGIN1Q9UJX0 560 aa4.33□□□□□ -1.72
VPS41-205ENST00000414632 PACSIN3Q9UKS6 424 aa4.33□□□□□ -1.72
VPS41-205ENST00000414632 MCTS1Q9ULC4 181 aaKnown RBP4.33□□□□□ -1.72
VPS41-205ENST00000414632 TMED7Q9Y3B3 224 aa4.33□□□□□ -1.72
VPS41-205ENST00000414632 MAP1AP78559 2803 aaPredicted RBP4.33□□□□□ -1.72
VPS41-205ENST00000414632 POLQO75417 2590 aa4.33□□□□□ -1.72
VPS41-205ENST00000414632 GMNCA6NCL1 334 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 ZNF814B7Z6K7 855 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 SULT2B1O00204 365 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 SMAD9O15198 467 aaKnown RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 ADAMDEC1O15204 470 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 RAMP1O60894 148 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 SHOX2O60902 331 aaPredicted RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 GCM2O75603 506 aaPredicted RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 CLEC3BP05452 202 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 CHRM2P08172 466 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 GUSBP08236 651 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 LYL1P12980 280 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 UQCRBP14927 111 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 TNFRSF1BP20333 461 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 CBLP22681 906 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 NR4A1P22736 598 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 CXCR1P25024 350 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 EDNRAP25101 427 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 HTR2AP28223 471 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 ELK4P28324 431 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 AGTR1P30556 359 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 ACAA2P42765 397 aaKnown RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 SLC1A3P43003 542 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 DIO1P49895 249 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 NUDT2P50583 147 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 POLR2HP52434 150 aaKnown RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 TPTEP56180 551 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 CTBP2P56545 445 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 RGS8P57771 180 aaPredicted RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 OR2B6P58173 313 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 COPZ1P61923 177 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 IRX1P78414 480 aaPredicted RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 TXNL4AP83876 142 aaKnown RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 TLE4Q04727 773 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 DMTNQ08495 405 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 FAM27E3Q08E93 113 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 DCTN2Q13561 401 aaKnown RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 MAPRE2Q15555 327 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 TSC22D1Q15714 1073 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 ZNF239Q16600 458 aaKnown RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 SYT14P1Q58G82 188 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 SLC25A53Q5H9E4 307 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 PDSS1Q5T2R2 415 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 WBP2NLQ6ICG8 309 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 OR2A2Q6IF42 318 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 ZNF474Q6S9Z5 364 aaPredicted RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 Q6ZWC4 215 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 FCRLAQ7L513 359 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 ZNF550Q7Z398 422 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 NUFIP2Q7Z417 695 aaKnown RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 GRINAQ7Z429 371 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 ADGRG3Q86Y34 549 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 C1QL4Q86Z23 238 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 RBM45Q8IUH3 476 aaKnown RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 TUSC5Q8IXB3 177 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 C11orf65Q8NCR3 313 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 RFKQ969G6 155 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 TAMM41Q96BW9 452 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 ZC3HAV1LQ96H79 300 aaKnown RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 ZNF300Q96RE9 604 aaPredicted RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 SFXN3Q9BWM7 321 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 RBM24Q9BX46 236 aaKnown RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 CTDSP1Q9GZU7 261 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 TMEM38AQ9H6F2 299 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 KAT8Q9H7Z6 458 aaKnown RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 RNF122Q9H9V4 155 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 HHATLQ9HCP6 504 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 BCL2L10Q9HD36 194 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 EXOSC3Q9NQT5 275 aaKnown RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 SERINC1Q9NRX5 453 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 TMEM45AQ9NWC5 275 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 BEX4Q9NWD9 120 aaPredicted RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 AURKAIP1Q9NWT8 199 aaPredicted RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 THUMPD1Q9NXG2 353 aaKnown RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 NKIRAS2Q9NYR9 191 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 ZNF629Q9UEG4 869 aaPredicted RBP4.32□□□□□ -1.72
VPS41-205ENST00000414632 CHRNA9Q9UGM1 479 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 PROCRQ9UNN8 238 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 ANGPT4Q9Y264 503 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 IFT52Q9Y366 437 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 ZNF175Q9Y473 711 aa4.32□□□□□ -1.72
VPS41-205ENST00000414632 CELSR1Q9NYQ6 3014 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 OTOGQ6ZRI0 2925 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 A0A1B0GWA3 101 aa4.31□□□□□ -1.72
VPS41-205ENST00000414632 CPSF4LA6NMK7 179 aaKnown RBP4.31□□□□□ -1.72
VPS41-205ENST00000414632 GJE1A6NN92 205 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms