RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 NPBWR2P48146 333 aa2.32□□□□□ -2.04
ATG4C-204ENST00000414558 DMRTC1Q5HYR2 192 aa2.32□□□□□ -2.04
ATG4C-204ENST00000414558 ZNF493Q6ZR52 646 aa2.32□□□□□ -2.04
ATG4C-204ENST00000414558 PEX26Q7Z412 305 aa2.32□□□□□ -2.04
ATG4C-204ENST00000414558 NECAP1Q8NC96 275 aa2.32□□□□□ -2.04
ATG4C-204ENST00000414558 TM4SF18Q96CE8 201 aa2.32□□□□□ -2.04
ATG4C-204ENST00000414558 SULT4A1Q9BR01 284 aa2.32□□□□□ -2.04
ATG4C-204ENST00000414558 ISYNA1Q9NPH2 558 aa2.32□□□□□ -2.04
ATG4C-204ENST00000414558 FARSBQ9NSD9 589 aaKnown RBP2.32□□□□□ -2.04
ATG4C-204ENST00000414558 PIPOXQ9P0Z9 390 aa2.32□□□□□ -2.04
ATG4C-204ENST00000414558 ZNF229Q9UJW7 825 aa2.32□□□□□ -2.04
ATG4C-204ENST00000414558 COL27A1Q8IZC6 1860 aaPredicted RBP2.31□□□□□ -2.04
ATG4C-204ENST00000414558 ZNF207O43670 478 aaKnown RBP2.31□□□□□ -2.04
ATG4C-204ENST00000414558 PRKAB2O43741 272 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 MGRN1O60291 552 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 CCNKO75909 580 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 GABARAPO95166 117 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 CHI3L1P36222 383 aaPredicted RBP2.31□□□□□ -2.04
ATG4C-204ENST00000414558 PPT1P50897 306 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 PITPNAQ00169 270 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 SLC39A6Q13433 755 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 USH1GQ495M9 461 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 DUX4L9Q6RFH8 374 aaPredicted RBP2.31□□□□□ -2.04
ATG4C-204ENST00000414558 NCCRP1Q6ZVX7 275 aaPredicted RBP2.31□□□□□ -2.04
ATG4C-204ENST00000414558 ABHD13Q7L211 337 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 ARL10Q8N8L6 244 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 ZNF382Q96SR6 550 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 CDX2Q99626 313 aaPredicted RBP2.31□□□□□ -2.04
ATG4C-204ENST00000414558 RNF5Q99942 180 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 MCCC2Q9HCC0 563 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 BFARQ9NZS9 450 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 ODF2LQ9ULJ1 636 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 KCNIP3Q9Y2W7 256 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 CENPJQ9HC77 1338 aaPredicted RBP2.31□□□□□ -2.04
ATG4C-204ENST00000414558 FRMPD3Q5JV73 1810 aa2.31□□□□□ -2.04
ATG4C-204ENST00000414558 FBN1P35555 2871 aaKnown RBP2.3□□□□□ -2.04
ATG4C-204ENST00000414558 IGLV3-22A0A075B6J6 115 aa2.3□□□□□ -2.04
ATG4C-204ENST00000414558 IGKV1D-13A0A0B4J2D9 117 aa2.3□□□□□ -2.04
ATG4C-204ENST00000414558 IGKV1-13P0DP09 117 aa2.3□□□□□ -2.04
ATG4C-204ENST00000414558 EPB41P11171 864 aaKnown RBP2.3□□□□□ -2.04
ATG4C-204ENST00000414558 NCF1P14598 390 aaPredicted RBP2.3□□□□□ -2.04
ATG4C-204ENST00000414558 SLC2A5P22732 501 aa2.3□□□□□ -2.04
ATG4C-204ENST00000414558 ARG2P78540 354 aa2.3□□□□□ -2.04
ATG4C-204ENST00000414558 SCRN3Q0VDG4 424 aa2.3□□□□□ -2.04
ATG4C-204ENST00000414558 CDC20Q12834 499 aa2.3□□□□□ -2.04
ATG4C-204ENST00000414558 POU2AF1Q16633 256 aa2.3□□□□□ -2.04
ATG4C-204ENST00000414558 KLHL38Q2WGJ6 581 aa2.3□□□□□ -2.04
ATG4C-204ENST00000414558 FAM78AQ5JUQ0 283 aa2.3□□□□□ -2.04
ATG4C-204ENST00000414558 TMEM225Q6GV28 225 aa2.3□□□□□ -2.04
ATG4C-204ENST00000414558 ZNF683Q8IZ20 524 aa2.3□□□□□ -2.04
ATG4C-204ENST00000414558 NARS2Q96I59 477 aaKnown RBP2.3□□□□□ -2.04
ATG4C-204ENST00000414558 UFSP2Q9NUQ7 469 aa2.3□□□□□ -2.04
ATG4C-204ENST00000414558 RNF14Q9UBS8 474 aa2.3□□□□□ -2.04
ATG4C-204ENST00000414558 GPATCH8Q9UKJ3 1502 aaKnown RBP2.3□□□□□ -2.04
ATG4C-204ENST00000414558 TUBGCP6Q96RT7 1819 aa2.3□□□□□ -2.04
ATG4C-204ENST00000414558 RPAP1Q9BWH6 1393 aaPredicted RBP2.29□□□□□ -2.04
ATG4C-204ENST00000414558 RAMP3O60896 148 aa2.29□□□□□ -2.04
ATG4C-204ENST00000414558 BCHEP06276 602 aa2.29□□□□□ -2.04
ATG4C-204ENST00000414558 CAPN1P07384 714 aa2.29□□□□□ -2.04
ATG4C-204ENST00000414558 RDXP35241 583 aaKnown RBP2.29□□□□□ -2.04
ATG4C-204ENST00000414558 MDH1P40925 334 aaKnown RBP2.29□□□□□ -2.04
ATG4C-204ENST00000414558 CSNK1A1P48729 337 aa2.29□□□□□ -2.04
ATG4C-204ENST00000414558 RGS4P49798 205 aa2.29□□□□□ -2.04
ATG4C-204ENST00000414558 PON3Q15166 354 aa2.29□□□□□ -2.04
ATG4C-204ENST00000414558 NUDCD3Q8IVD9 361 aa2.29□□□□□ -2.04
ATG4C-204ENST00000414558 ANKFN1Q8N957 763 aa2.29□□□□□ -2.04
ATG4C-204ENST00000414558 TRMT10AQ8TBZ6 339 aaKnown RBP2.29□□□□□ -2.04
ATG4C-204ENST00000414558 YY1AP1Q9H869 796 aa2.29□□□□□ -2.04
ATG4C-204ENST00000414558 COQ10BQ9H8M1 238 aa2.29□□□□□ -2.04
ATG4C-204ENST00000414558 ADAP2Q9NPF8 381 aa2.29□□□□□ -2.04
ATG4C-204ENST00000414558 POLE3Q9NRF9 147 aa2.29□□□□□ -2.04
ATG4C-204ENST00000414558 ZNF586Q9NXT0 402 aa2.29□□□□□ -2.04
ATG4C-204ENST00000414558 UBIAD1Q9Y5Z9 338 aa2.29□□□□□ -2.04
ATG4C-204ENST00000414558 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.28□□□□□ -2.04
ATG4C-204ENST00000414558 MSH6P52701 1360 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 ATP8B3O60423 1300 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 TOM1O60784 492 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 FABP3P05413 133 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 OR56A5P0C7T3 313 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 C1GALT1C1LP0DN25 315 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 DRD5P21918 477 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 AK4P27144 223 aaPredicted RBP2.28□□□□□ -2.04
ATG4C-204ENST00000414558 OPRD1P41143 372 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 SLC36A3Q495N2 470 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 TTC23Q5W5X9 447 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 TMEM179Q6ZVK1 233 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 ECHDC2Q86YB7 292 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 TMEM123Q8N131 208 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 OR5D13Q8NGL4 314 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 SH3GL3Q99963 347 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 ZNF717Q9BY31 904 aaPredicted RBP2.28□□□□□ -2.04
ATG4C-204ENST00000414558 MRPL37Q9BZE1 423 aaKnown RBP2.28□□□□□ -2.04
ATG4C-204ENST00000414558 PARP12Q9H0J9 701 aaKnown RBP2.28□□□□□ -2.04
ATG4C-204ENST00000414558 SYNDIG1Q9H7V2 258 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 CARHSP1Q9Y2V2 147 aaKnown RBP2.28□□□□□ -2.04
ATG4C-204ENST00000414558 N6AMT1Q9Y5N5 214 aa2.28□□□□□ -2.04
ATG4C-204ENST00000414558 TET2Q6N021 2002 aaPredicted RBP2.27□□□□□ -2.05
ATG4C-204ENST00000414558 GPRASP1Q5JY77 1395 aa2.27□□□□□ -2.05
ATG4C-204ENST00000414558 PNPLA6Q8IY17 1366 aa2.27□□□□□ -2.05
ATG4C-204ENST00000414558 A0A0B4J2A0 478 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms