RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 SKA3Q8IX90 412 aa10.37□□□□□ -0.75
LIMS2-210ENST00000413578 C10orf111Q8N326 155 aa10.37□□□□□ -0.75
LIMS2-210ENST00000413578 PAQR4Q8N4S7 273 aaPredicted RBP10.37□□□□□ -0.75
LIMS2-210ENST00000413578 OR9I1Q8NGQ6 314 aa10.37□□□□□ -0.75
LIMS2-210ENST00000413578 TMEM54Q969K7 222 aa10.37□□□□□ -0.75
LIMS2-210ENST00000413578 ITCHQ96J02 903 aa10.37□□□□□ -0.75
LIMS2-210ENST00000413578 TSPAN32Q96QS1 320 aa10.37□□□□□ -0.75
LIMS2-210ENST00000413578 SLC6A7Q99884 636 aa10.37□□□□□ -0.75
LIMS2-210ENST00000413578 WFDC6Q9BQY6 131 aa10.37□□□□□ -0.75
LIMS2-210ENST00000413578 ZNF747Q9BV97 191 aa10.37□□□□□ -0.75
LIMS2-210ENST00000413578 SUCNR1Q9BXA5 334 aa10.37□□□□□ -0.75
LIMS2-210ENST00000413578 RMND5AQ9H871 391 aa10.37□□□□□ -0.75
LIMS2-210ENST00000413578 CACYBPQ9HB71 228 aaKnown RBP10.37□□□□□ -0.75
LIMS2-210ENST00000413578 TCF7L2Q9NQB0 619 aa10.37□□□□□ -0.75
LIMS2-210ENST00000413578 HINT3Q9NQE9 182 aaKnown RBP10.37□□□□□ -0.75
LIMS2-210ENST00000413578 OPN4Q9UHM6 478 aa10.37□□□□□ -0.75
LIMS2-210ENST00000413578 DUSP13Q9UII6 198 aa10.37□□□□□ -0.75
LIMS2-210ENST00000413578 A0A0G2JMP0 313 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 A0A0X1KG70 313 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 A0A1W2PPW3 197 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 J3QLI3 93 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 TMPRSS2O15393 492 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 TPST1O60507 370 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 MPZL1O95297 269 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 ANP32DO95626 131 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 SNAP29O95721 258 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 NQO1P15559 274 aaKnown RBP10.36□□□□□ -0.75
LIMS2-210ENST00000413578 ERVS71-1P61550 626 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 UBA52P62987 128 aaKnown RBP10.36□□□□□ -0.75
LIMS2-210ENST00000413578 PCGF3Q3KNV8 242 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 KRT71Q3SY84 523 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 AVPI1Q5T686 147 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 RGS7BPQ6MZT1 257 aaPredicted RBP10.36□□□□□ -0.75
LIMS2-210ENST00000413578 SNX32Q86XE0 403 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 MSRB3Q8IXL7 192 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 MREGQ8N565 214 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 OR4M2Q8NGB6 313 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 OR6N1Q8NGY5 312 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 RNF217Q8TC41 542 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 MGARPQ8TDB4 240 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 DVL3Q92997 716 aaPredicted RBP10.36□□□□□ -0.75
LIMS2-210ENST00000413578 SLC47A1Q96FL8 570 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 EPYCQ99645 322 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 TMEM43Q9BTV4 400 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 ASPNQ9BXN1 380 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 ZNF696Q9H7X3 374 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 SLC25A37Q9NYZ2 338 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 TAAR3PQ9P1P4 343 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 TESQ9UGI8 421 aaKnown RBP10.36□□□□□ -0.75
LIMS2-210ENST00000413578 WIPI2Q9Y4P8 454 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 GMEB1Q9Y692 573 aa10.36□□□□□ -0.75
LIMS2-210ENST00000413578 SLC22A23A1A5C7 686 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 TRPC5OSA6NMA1 111 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 ZNF726A6NNF4 738 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 CLIC1O00299 241 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 RGS16O15492 202 aaPredicted RBP10.35□□□□□ -0.75
LIMS2-210ENST00000413578 ZNF500O60304 480 aaPredicted RBP10.35□□□□□ -0.75
LIMS2-210ENST00000413578 CDC14BO60729 498 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 ARAFP10398 606 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 ADRA2CP18825 462 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 CSNK1A1P48729 337 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 POLR2JP52435 117 aaKnown RBP10.35□□□□□ -0.75
LIMS2-210ENST00000413578 KLF3P57682 345 aaPredicted RBP10.35□□□□□ -0.75
LIMS2-210ENST00000413578 CCL8P80075 99 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 MVKQ03426 396 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 PMS2P3Q13401 168 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 OR1Q1Q15612 314 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 NKPD1Q17RQ9 610 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 ALKBH6Q3KRA9 238 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 C6orf10Q5SRN2 563 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 LRFN4Q6PJG9 635 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 LINC00114Q6XXX2 140 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 SLC22A24Q8N4F4 322 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 SLC30A7Q8NEW0 376 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 OR6X1Q8NH79 312 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 RAB39BQ96DA2 213 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 TMEM38BQ9NVV0 291 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 THAP1Q9NVV9 213 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 GLTPQ9NZD2 209 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 CACNG2Q9Y698 323 aa10.35□□□□□ -0.75
LIMS2-210ENST00000413578 PRKDCP78527 4128 aaKnown RBP10.35□□□□□ -0.75
LIMS2-210ENST00000413578 IGHV1-69-2A0A0G2JMI3 117 aa10.34□□□□□ -0.75
LIMS2-210ENST00000413578 MFN2O95140 757 aa10.34□□□□□ -0.75
LIMS2-210ENST00000413578 FAM157BP0CG42 384 aa10.34□□□□□ -0.75
LIMS2-210ENST00000413578 HKR1P10072 659 aa10.34□□□□□ -0.75
LIMS2-210ENST00000413578 CCL2P13500 99 aa10.34□□□□□ -0.75
LIMS2-210ENST00000413578 GATA3P23771 443 aa10.34□□□□□ -0.75
LIMS2-210ENST00000413578 LSP1P33241 339 aa10.34□□□□□ -0.75
LIMS2-210ENST00000413578 MRPL19P49406 292 aaKnown RBP10.34□□□□□ -0.75
LIMS2-210ENST00000413578 CDH12P55289 794 aa10.34□□□□□ -0.75
LIMS2-210ENST00000413578 BIDP55957 195 aa10.34□□□□□ -0.75
LIMS2-210ENST00000413578 WDR4P57081 412 aaKnown RBP10.34□□□□□ -0.75
LIMS2-210ENST00000413578 NRN1LQ496H8 165 aa10.34□□□□□ -0.75
LIMS2-210ENST00000413578 LRIF1Q5T3J3 769 aa10.34□□□□□ -0.75
LIMS2-210ENST00000413578 SWT1Q5T5J6 900 aaKnown RBP10.34□□□□□ -0.75
LIMS2-210ENST00000413578 WDR93Q6P2C0 686 aa10.34□□□□□ -0.75
LIMS2-210ENST00000413578 TMEM154Q6P9G4 183 aa10.34□□□□□ -0.75
LIMS2-210ENST00000413578 SLC2A7Q6PXP3 512 aa10.34□□□□□ -0.75
LIMS2-210ENST00000413578 OR5J2Q8NH18 312 aa10.34□□□□□ -0.75
LIMS2-210ENST00000413578 NFKBIDQ8NI38 313 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms