RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 TNK1Q13470 666 aa13.65□□□□□ -0.22
MCF2L-211ENST00000413354 MELKQ14680 651 aa13.65□□□□□ -0.22
MCF2L-211ENST00000413354 RAB35Q15286 201 aa13.65□□□□□ -0.22
MCF2L-211ENST00000413354 GSG1Q2KHT4 349 aa13.65□□□□□ -0.22
MCF2L-211ENST00000413354 FKBP9P1Q75LS8 142 aa13.65□□□□□ -0.22
MCF2L-211ENST00000413354 VTCN1Q7Z7D3 282 aa13.65□□□□□ -0.22
MCF2L-211ENST00000413354 MDP1Q86V88 176 aa13.65□□□□□ -0.22
MCF2L-211ENST00000413354 CIARTQ8N365 385 aaPredicted RBP13.65□□□□□ -0.22
MCF2L-211ENST00000413354 NUP37Q8NFH4 326 aa13.65□□□□□ -0.22
MCF2L-211ENST00000413354 INIPQ9NRY2 104 aa13.65□□□□□ -0.22
MCF2L-211ENST00000413354 CA10Q9NS85 328 aa13.65□□□□□ -0.22
MCF2L-211ENST00000413354 C20orf141Q9NUB4 165 aa13.65□□□□□ -0.22
MCF2L-211ENST00000413354 RPS6KA6Q9UK32 745 aa13.65□□□□□ -0.22
MCF2L-211ENST00000413354 FBXO9Q9UK97 447 aaPredicted RBP13.65□□□□□ -0.22
MCF2L-211ENST00000413354 CSPG4Q6UVK1 2322 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 NPIPB13A6NJU9 1138 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 VSTM5A8MXK1 200 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 NPIPB4C9JG80 1138 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 UBL3O95164 117 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 SERPINA1P01009 418 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 PGA4P0DJD7 388 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 PGA3P0DJD8 388 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 CD79AP11912 226 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 NR2C1P13056 603 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 B4GALT1P15291 398 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 ACVR1BP36896 505 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 CLRN1P58418 232 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 TRAM2Q15035 370 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 PIWIL3Q7Z3Z3 882 aaKnown RBP13.64□□□□□ -0.23
MCF2L-211ENST00000413354 CYP4Z1Q86W10 505 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 HSH2DQ96JZ2 352 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 SMR3AQ99954 134 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 GMPR2Q9P2T1 348 aaKnown RBP13.64□□□□□ -0.23
MCF2L-211ENST00000413354 GDF2Q9UK05 429 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-211ENST00000413354 CR1P17927 2039 aa13.64□□□□□ -0.23
MCF2L-211ENST00000413354 IGHV2OR16-5A0A0B4J2B6 119 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 DCTN3O75935 186 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 FARS2O95363 451 aaKnown RBP13.63□□□□□ -0.23
MCF2L-211ENST00000413354 RAB36O95755 333 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 HLA-HP01893 362 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 CSF3P09919 207 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 TSPAN19P0C672 248 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 IFI30P13284 250 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 SERPINF1P36955 418 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 AQP2P41181 271 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 DSCR9P59020 149 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 TAF11Q15544 211 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 ANKDD1AQ495B1 522 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 CLEC2AQ6UVW9 174 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 DPPA2Q7Z7J5 298 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 WDFY1Q8IWB7 410 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 NOXO1Q8NFA2 376 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 ASB10Q8WXI3 467 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 BPIFA2Q96DR5 249 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 FBXO17Q96EF6 278 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 RHNO1Q9BSD3 238 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 ANKRD19PQ9H560 264 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 ZNF442Q9H7R0 627 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 B3GNT2Q9NY97 397 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 ADA2Q9NZK5 511 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 ARL2BPQ9Y2Y0 163 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 FKBP7Q9Y680 259 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 ZFHX3Q15911 3703 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 HIVEP2P31629 2446 aa13.63□□□□□ -0.23
MCF2L-211ENST00000413354 NSD1Q96L73 2696 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-211ENST00000413354 ZNF503-AS2A6NEH8 195 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 B9A039 149 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 DHHO43323 396 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 SSX4O60224 188 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 PIP5K1CO60331 668 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 NDUFS7O75251 213 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 LY6G6DO95868 133 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 F13BP05160 661 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 CELA3BP08861 270 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 OR8G3PP0DMU2 310 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 SAGP10523 405 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-211ENST00000413354 CALCRP30988 508 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 YAP1P46937 504 aaKnown RBP13.62□□□□□ -0.23
MCF2L-211ENST00000413354 ZNF84P51523 738 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 NRN1LQ496H8 165 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 DNM1P46Q6ZS02 220 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 RNF113BQ8IZP6 322 aaKnown RBP13.62□□□□□ -0.23
MCF2L-211ENST00000413354 ACOT11Q8WXI4 607 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-211ENST00000413354 LRRC37BQ96QE4 947 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 REG4Q9BYZ8 158 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 NDEL1Q9GZM8 345 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 SEC61A2Q9H9S3 476 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 TMEM38BQ9NVV0 291 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 NDE1Q9NXR1 346 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 SAMD4AQ9UPU9 718 aaKnown RBP13.62□□□□□ -0.23
MCF2L-211ENST00000413354 HIF3AQ9Y2N7 669 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 NAV3Q8IVL0 2385 aa13.62□□□□□ -0.23
MCF2L-211ENST00000413354 RNF223E7ERA6 249 aa13.61□□□□□ -0.23
MCF2L-211ENST00000413354 MGRN1O60291 552 aa13.61□□□□□ -0.23
MCF2L-211ENST00000413354 QDPRP09417 244 aa13.61□□□□□ -0.23
MCF2L-211ENST00000413354 ACADSP16219 412 aa13.61□□□□□ -0.23
MCF2L-211ENST00000413354 NCK1P16333 377 aa13.61□□□□□ -0.23
MCF2L-211ENST00000413354 PTDSS1P48651 473 aaKnown RBP13.61□□□□□ -0.23
MCF2L-211ENST00000413354 SLC9A3P48764 834 aa13.61□□□□□ -0.23
MCF2L-211ENST00000413354 EFNA4P52798 201 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms