RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 THEM6Q8WUY1 208 aa7.87□□□□□ -1.15
PBRM1-209ENST00000412587 TMED6Q8WW62 240 aa7.87□□□□□ -1.15
PBRM1-209ENST00000412587 TMEM19Q96HH6 336 aa7.87□□□□□ -1.15
PBRM1-209ENST00000412587 BTF3L4Q96K17 158 aa7.87□□□□□ -1.15
PBRM1-209ENST00000412587 GGACTQ9BVM4 153 aa7.87□□□□□ -1.15
PBRM1-209ENST00000412587 PARPBPQ9NWS1 579 aa7.87□□□□□ -1.15
PBRM1-209ENST00000412587 COA4Q9NYJ1 87 aa7.87□□□□□ -1.15
PBRM1-209ENST00000412587 AK6Q9Y3D8 172 aaKnown RBP7.87□□□□□ -1.15
PBRM1-209ENST00000412587 FAM230AA0A1W2PPH8 454 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 SUSD5O60279 629 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 ZNF84P51523 738 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 ZNF79Q15937 498 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 THEM4Q5T1C6 240 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 MAMSTRQ6ZN01 415 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 RFLNAQ6ZTI6 216 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 LRRTM1Q86UE6 522 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 PUSL1Q8N0Z8 303 aaKnown RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 FAM24BQ8N5W8 94 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 SYNPRQ8TBG9 265 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 CHTF18Q8WVB6 975 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 FRZBQ92765 325 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 HAS2Q92819 552 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 NAT6Q93015 286 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 MSLNLQ96KJ4 702 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 PBX4Q9BYU1 374 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 APMAPQ9HDC9 416 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 SIT1Q9Y3P8 196 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 NPFFR2Q9Y5X5 522 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 SLCO1B1Q9Y6L6 691 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 PAPPA2Q9BXP8 1791 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 TRBV2A0A0J9YWF9 115 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 A0A1W2PPQ1 181 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 H7C417 338 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 AKR1C3P42330 323 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 RNF144AP50876 292 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 CAMK2DQ13557 499 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 SMAD2Q15796 467 aaKnown RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 OR2A2Q6IF42 318 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 PARM1Q6UWI2 310 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 TMEM151BQ8IW70 566 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 OR2AK2Q8NG84 335 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 TRMT61AQ96FX7 289 aaKnown RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 GPR78Q96P69 363 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 CPPED1Q9BRF8 314 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 DUSP23Q9BVJ7 150 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 HHATLQ9HCP6 504 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 LYRM2Q9NU23 88 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 UQCC1Q9NVA1 299 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 TMEFF2Q9UIK5 374 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 THSD7AQ9UPZ6 1657 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 LAMA4Q16363 1823 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 TRAV18A0A075B6X5 111 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 A0A0A6YYC8 382 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 TEX13DA0A0J9YY54 714 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 TMEM129A0AVI4 362 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 I3L1I5 382 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 PPP6CO00743 305 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 BCAT2O15382 392 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 IL5P05113 134 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 DBIP07108 87 aaKnown RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 ACAA1P09110 424 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 ZNF888P0CJ79 500 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 SDC1P18827 310 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 CXCL3P19876 107 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 PGCP20142 388 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 TBXA2RP21731 343 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 OTX2P32243 289 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 FRKP42685 505 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 F2RL1P55085 397 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 SKP2Q13309 424 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 DBX2Q6ZNG2 339 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 ZNF679Q8IYX0 411 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 ACOT4Q8N9L9 421 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 OR1S2Q8NGQ3 325 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 OR6K3Q8NGY3 331 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 RSC1A1Q92681 617 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 SEC22AQ96IW7 307 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 PRRT1Q99946 306 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 SYNPO2LQ9H987 977 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 TMEM30AQ9NV96 361 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 B4GALT7Q9UBV7 327 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 A6NCN8 305 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 C11orf98E9PRG8 122 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 DNASE2O00115 360 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 CYB5BO43169 146 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 FZD6O60353 706 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 SNRPBP14678 240 aaKnown RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 RPL23AP62750 156 aaKnown RBP7.86□□□□□ -1.15
PBRM1-209ENST00000412587 DGCR2P98153 550 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 GNMTQ14749 295 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 ZNF77Q15935 545 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 HIPK2Q9H2X6 1198 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 TAAR2Q9P1P5 351 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 GPR52Q9Y2T5 361 aa7.86□□□□□ -1.15
PBRM1-209ENST00000412587 PAPPAQ13219 1627 aa7.85□□□□□ -1.15
PBRM1-209ENST00000412587 C7orf66A4D0T2 115 aa7.85□□□□□ -1.15
PBRM1-209ENST00000412587 A8MXK9 166 aa7.85□□□□□ -1.15
PBRM1-209ENST00000412587 GABARAPH6UMI1 98 aa7.85□□□□□ -1.15
PBRM1-209ENST00000412587 SIAH2O43255 324 aa7.85□□□□□ -1.15
PBRM1-209ENST00000412587 PVRP15151 417 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms