RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CCKARP32238 428 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 RPL29P47914 159 aaKnown RBP3.94□□□□□ -1.78
LSM5-205ENST00000409952 GSCP56915 257 aaPredicted RBP3.94□□□□□ -1.78
LSM5-205ENST00000409952 LMO4P61968 165 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 MAPRE2Q15555 327 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 PARP15Q460N3 678 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 ADAMTSL4-AS1Q5T5F5 129 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 PTRHD1Q6GMV3 140 aaKnown RBP3.94□□□□□ -1.78
LSM5-205ENST00000409952 ACOT7LQ6ZUV0 252 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 SMIM29Q86T20 159 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 LRRC49Q8IUZ0 686 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 NRMQ8IXM6 262 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 PRELID2Q8N945 189 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 LMO3Q8TAP4 145 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 LGALS14Q8TCE9 139 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 TMEM239Q8WW34 195 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 TMEM190Q8WZ59 177 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 TFGQ92734 400 aaPredicted RBP3.94□□□□□ -1.78
LSM5-205ENST00000409952 GTF2H4Q92759 462 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 POM121L2Q96KW2 1035 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 LYZL4Q96KX0 146 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 EPYCQ99645 322 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 FOLH1BQ9HBA9 442 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 ACP6Q9NPH0 428 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 TIGARQ9NQ88 270 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 PLCXD1Q9NUJ7 323 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 THAP10Q9P2Z0 257 aaPredicted RBP3.94□□□□□ -1.78
LSM5-205ENST00000409952 B4GALT7Q9UBV7 327 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 DCDC2Q9UHG0 476 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 MRM2Q9UI43 246 aaKnown RBP3.94□□□□□ -1.78
LSM5-205ENST00000409952 PYGO1Q9Y3Y4 419 aa3.94□□□□□ -1.78
LSM5-205ENST00000409952 JCADQ9P266 1359 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 IGLV3-22A0A075B6J6 115 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 C1orf232A0A0U1RR37 186 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 MEIOCA2RUB1 952 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 GOLGA8RI6L899 631 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 PLPP1O14494 284 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 PRMT5O14744 637 aaPredicted RBP3.93□□□□□ -1.78
LSM5-205ENST00000409952 PLEKHA8P1O95397 391 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 HBE1P02100 147 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 GLAP06280 429 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 KLK3P07288 261 aaPredicted RBP3.93□□□□□ -1.78
LSM5-205ENST00000409952 RBMY1CP0DJD4 496 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 PLA2G2AP14555 144 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 PSMC3P17980 439 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 PSMB6P28072 239 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 CD40LGP29965 261 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 SHMT2P34897 504 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 TIMP3P35625 211 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 P2RY2P41231 377 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 BIDP55957 195 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 CLDN6P56747 220 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 MYL6P60660 151 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 TNXAQ16473 311 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 NSUN5P1Q3KNT7 163 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 PAGE2BQ5JRK9 111 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 EOGTQ5NDL2 527 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 VAX1Q5SQQ9 334 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 BSPRYQ5W0U4 402 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 ADNP2Q6IQ32 1131 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 UFSP1Q6NVU6 142 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 LHFPL3Q86UP9 236 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 C9orf40Q8IXQ3 194 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 FTMTQ8N4E7 242 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 CYB561A3Q8NBI2 242 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 AQP11Q8NBQ7 271 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 NOXO1Q8NFA2 376 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 OR6N2Q8NGY6 317 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 ZNF564Q8TBZ8 553 aaPredicted RBP3.93□□□□□ -1.78
LSM5-205ENST00000409952 ACER1Q8TDN7 264 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 TFB1MQ8WVM0 346 aaKnown RBP3.93□□□□□ -1.78
LSM5-205ENST00000409952 BAALCQ8WXS3 180 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 SMARCD2Q92925 531 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 DUS3LQ96G46 650 aaKnown RBP3.93□□□□□ -1.78
LSM5-205ENST00000409952 MEIS3Q99687 375 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 KLHDC3Q9BQ90 382 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 PELOQ9BRX2 385 aaKnown RBP3.93□□□□□ -1.78
LSM5-205ENST00000409952 OSBPL10Q9BXB5 764 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 ACTR6Q9GZN1 396 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 NAA50Q9GZZ1 169 aaKnown RBP3.93□□□□□ -1.78
LSM5-205ENST00000409952 SYT4Q9H2B2 425 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 SIAEQ9HAT2 523 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 CLN6Q9NWW5 311 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 SLC17A7Q9P2U7 560 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 PRODH2Q9UF12 536 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 MMP17Q9ULZ9 603 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 ING4Q9UNL4 249 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 V9GYY9 64 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 GAKO14976 1311 aa3.93□□□□□ -1.78
LSM5-205ENST00000409952 SBNO1A3KN83 1393 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 IGLV4-3A0A075B6K6 122 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 GLYATL1P3A0A0U1RQE8 302 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 A0A1B0GUV1 79 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 LYRM9A8MSI8 78 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 FAM220BPB1ANY3 271 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 ERVV-2B6SEH9 535 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 SLC9A3R1O14745 358 aaPredicted RBP3.92□□□□□ -1.78
LSM5-205ENST00000409952 ZMPSTE24O75844 475 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 SLC2A10O95528 541 aa3.92□□□□□ -1.78
LSM5-205ENST00000409952 SEMA4FO95754 770 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms