RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 CLCF1Q9UBD9 225 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 RALYQ9UKM9 306 aaKnown RBP11.17□□□□□ -0.62
PMS1-204ENST00000409823 BAIAP2Q9UQB8 552 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 FAM215AQ9Y5M1 114 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 IGKV1D-43A0A0B4J1Z2 117 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 PRSS37A4D1T9 235 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 PTGES3LE9PB15 166 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 TRMUO75648 421 aaKnown RBP11.17□□□□□ -0.62
PMS1-204ENST00000409823 PYCR1P32322 319 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 SIRPAP78324 504 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 GPR139Q6DWJ6 353 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 ADGRE4PQ86SQ3 457 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 DOLPP1Q86YN1 238 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 OR6V1Q8N148 313 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 FAM57AQ8TBR7 257 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 NSMAFQ92636 917 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 ZNF566Q969W8 418 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 RNF122Q9H9V4 155 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 NOSIPQ9Y314 301 aaKnown RBP11.17□□□□□ -0.62
PMS1-204ENST00000409823 FREM1Q5H8C1 2179 aa11.17□□□□□ -0.62
PMS1-204ENST00000409823 AHRRA9YTQ3 701 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 M0R3G1 203 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 PRRG2O14669 202 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 TXNDC12O95881 172 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 APEHP13798 732 aaKnown RBP11.16□□□□□ -0.62
PMS1-204ENST00000409823 CENPAP49450 140 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 CLRN1P58418 232 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 PIGFQ07326 219 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 FOXF2Q12947 444 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 SEM1Q6ZVN7 128 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 SHFQ7M4L6 423 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 NUFIP2Q7Z417 695 aaKnown RBP11.16□□□□□ -0.62
PMS1-204ENST00000409823 MED12LQ86YW9 2145 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 SLC43A2Q8N370 569 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 CNEP1R1Q8N9A8 125 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 OR6K6Q8NGW6 343 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 SLC25A44Q96H78 314 aaPredicted RBP11.16□□□□□ -0.62
PMS1-204ENST00000409823 ZNF582Q96NG8 517 aaPredicted RBP11.16□□□□□ -0.62
PMS1-204ENST00000409823 SF3B5Q9BWJ5 86 aaKnown RBP11.16□□□□□ -0.62
PMS1-204ENST00000409823 FLNCQ14315 2725 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 LOC102725191A0A1B0GVB3 256 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 FIGNL2A6NMB9 653 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 IDH3BO43837 385 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 SLC16A7O60669 478 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 IGHMP01871 453 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 CTLA4P16410 223 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 PER3P56645 1201 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 MRPL49Q13405 166 aaKnown RBP11.16□□□□□ -0.62
PMS1-204ENST00000409823 APOFQ13790 326 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 POU4F3Q15319 338 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 PHYHD1Q5SRE7 291 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 C6orf141Q5SZD1 244 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 AAED1Q7RTV5 226 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 TRUB1Q8WWH5 349 aaKnown RBP11.16□□□□□ -0.62
PMS1-204ENST00000409823 ALKBH3Q96Q83 286 aaPredicted RBP11.16□□□□□ -0.62
PMS1-204ENST00000409823 OR2M2Q96R28 347 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 SHANK1Q9Y566 2161 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 DOCK7Q96N67 2140 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 SLC22A23A1A5C7 686 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 MRPL33O75394 65 aaKnown RBP11.16□□□□□ -0.62
PMS1-204ENST00000409823 TOXO94900 526 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 YES1P07947 543 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 STSP08842 583 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 PGA4P0DJD7 388 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 PGA3P0DJD8 388 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 EDN3P14138 238 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 PAICSP22234 425 aaKnown RBP11.16□□□□□ -0.62
PMS1-204ENST00000409823 SNRPGP62308 76 aaKnown RBP11.16□□□□□ -0.62
PMS1-204ENST00000409823 UGT2A3Q6UWM9 527 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 FAM26EQ8N5C1 309 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 OR6N1Q8NGY5 312 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 ZNF837Q96EG3 531 aaPredicted RBP11.16□□□□□ -0.62
PMS1-204ENST00000409823 KCNK17Q96T54 332 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 DDOQ99489 341 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 CLN6Q9NWW5 311 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 H2AFY2Q9P0M6 372 aaPredicted RBP11.16□□□□□ -0.62
PMS1-204ENST00000409823 KLHL21Q9UJP4 597 aa11.16□□□□□ -0.62
PMS1-204ENST00000409823 IGHG1P01857 330 aa11.15□□□□□ -0.62
PMS1-204ENST00000409823 MRPL3P09001 348 aaKnown RBP11.15□□□□□ -0.62
PMS1-204ENST00000409823 CDH11P55287 796 aa11.15□□□□□ -0.62
PMS1-204ENST00000409823 RNPS1Q15287 305 aaKnown RBP11.15□□□□□ -0.62
PMS1-204ENST00000409823 C9orf135Q5VTT2 229 aa11.15□□□□□ -0.62
PMS1-204ENST00000409823 AADACL4Q5VUY2 407 aa11.15□□□□□ -0.62
PMS1-204ENST00000409823 NAXEQ8NCW5 288 aa11.15□□□□□ -0.62
PMS1-204ENST00000409823 PROKR2Q8NFJ6 384 aa11.15□□□□□ -0.62
PMS1-204ENST00000409823 OR6X1Q8NH79 312 aa11.15□□□□□ -0.62
PMS1-204ENST00000409823 ZMYND19Q96E35 227 aaPredicted RBP11.15□□□□□ -0.62
PMS1-204ENST00000409823 ZNF175Q9Y473 711 aa11.15□□□□□ -0.62
PMS1-204ENST00000409823 TRGV8A0A0C4DH27 118 aa11.15□□□□□ -0.63
PMS1-204ENST00000409823 UPK3AO75631 287 aa11.15□□□□□ -0.63
PMS1-204ENST00000409823 ZNF432O94892 652 aa11.15□□□□□ -0.63
PMS1-204ENST00000409823 RENP00797 406 aa11.15□□□□□ -0.63
PMS1-204ENST00000409823 SPI1P17947 270 aa11.15□□□□□ -0.63
PMS1-204ENST00000409823 MVKQ03426 396 aa11.15□□□□□ -0.63
PMS1-204ENST00000409823 NSUN5P2Q63ZY6 315 aa11.15□□□□□ -0.63
PMS1-204ENST00000409823 B3GNT6Q6ZMB0 384 aa11.15□□□□□ -0.63
PMS1-204ENST00000409823 FBLIM1Q8WUP2 373 aa11.15□□□□□ -0.63
PMS1-204ENST00000409823 MRPL13Q9BYD1 178 aaKnown RBP11.15□□□□□ -0.63
PMS1-204ENST00000409823 HSPE1-MOB4S4R3N1 261 aa11.15□□□□□ -0.63
PMS1-204ENST00000409823 MYO18BQ8IUG5 2567 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms