RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 PGM2L1Q6PCE3 622 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 ZNF704Q6ZNC4 412 aaPredicted RBP9.56□□□□□ -0.88
CHMP3-205ENST00000409810 C20orf204Q6ZNR8 217 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 LINGO2Q7L985 606 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 LINC00471Q8N535 108 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 OR13C2Q8NGS9 318 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 OR51A7Q8NH64 312 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 MOSPD2Q8NHP6 518 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 FNDC8Q8TC99 324 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 TMEM54Q969K7 222 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 RADILQ96JH8 1075 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 ALPK1Q96QP1 1244 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 YY1AP1Q9H869 796 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 PLEKHF2Q9H8W4 249 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 REEP1Q9H902 201 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 GLTPQ9NZD2 209 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 ST6GALNAC2Q9UJ37 374 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 RNF115Q9Y4L5 304 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 POLQO75417 2590 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 A0A096LPE4 126 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 A0A1W2PPZ6 126 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 A0A1W2PR80 420 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 DHRS12A0PJE2 317 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 M0R1B8 84 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 TNFRSF11BO00300 401 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 CDC42EP2O14613 210 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 GSC2O15499 205 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 TRMUO75648 421 aaKnown RBP9.55□□□□□ -0.88
CHMP3-205ENST00000409810 NDUFB2O95178 105 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 RAF1P04049 648 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 CD14P08571 375 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 PGA4P0DJD7 388 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 PGA3P0DJD8 388 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 LOXP28300 417 aaPredicted RBP9.55□□□□□ -0.88
CHMP3-205ENST00000409810 CAPZA2P47755 286 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 LIMS1P48059 325 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 ZNF83P51522 516 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 ZNF84P51523 738 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 RPL27P61353 136 aaKnown RBP9.55□□□□□ -0.88
CHMP3-205ENST00000409810 ARF1P84077 181 aaKnown RBP9.55□□□□□ -0.88
CHMP3-205ENST00000409810 BSPH1Q075Z2 132 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 KEAP1Q14145 624 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 LAPTM4AQ15012 233 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 SEC23BQ15437 767 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 PHYHD1Q5SRE7 291 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 OR2T5Q6IEZ7 315 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 SEZ6L2Q6UXD5 910 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 ZNF813Q6ZN06 617 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 SPATA24Q86W54 205 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 MEX3DQ86XN8 651 aaKnown RBP9.55□□□□□ -0.88
CHMP3-205ENST00000409810 DEPDC4Q8N2C3 294 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 WDR31Q8NA23 367 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 OR2T29Q8NH02 315 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 FANK1Q8TC84 345 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 BCL2L2Q92843 193 aaPredicted RBP9.55□□□□□ -0.88
CHMP3-205ENST00000409810 RSRC1Q96IZ7 334 aaKnown RBP9.55□□□□□ -0.88
CHMP3-205ENST00000409810 HS3ST6Q96QI5 342 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 TNFRSF13CQ96RJ3 184 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 FOXB1Q99853 325 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 KCNS3Q9BQ31 491 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 TMEM204Q9BSN7 226 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 FUZQ9BT04 418 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 ALG12Q9BV10 488 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 CADM1Q9BY67 442 aaKnown RBP9.55□□□□□ -0.88
CHMP3-205ENST00000409810 UBTD1Q9HAC8 227 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 NPAP1Q9NZP6 1156 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 POMPQ9Y244 141 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 LYVE1Q9Y5Y7 322 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 CCDC168Q8NDH2 2452 aa9.55□□□□□ -0.88
CHMP3-205ENST00000409810 DPRXA6NFQ7 191 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 UNC119BA6NIH7 251 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 XKRYO14609 159 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 ABCD4O14678 606 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 DHHO43323 396 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 CCNB2O95067 398 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 FARS2O95363 451 aaKnown RBP9.54□□□□□ -0.88
CHMP3-205ENST00000409810 QDPRP09417 244 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 FPR3P25089 353 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 CD40P25942 277 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 ACVR1BP36896 505 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 HMGA2P52926 109 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 CD47Q08722 323 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 C3orf36Q3SXR2 165 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 ARMC4Q5T2S8 1044 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 SMARCD3Q6STE5 483 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 CCDC121Q6ZUS5 278 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 ZNF627Q7L945 461 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 IGFN1Q86VF2 1251 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 PIAS4Q8N2W9 510 aaPredicted RBP9.54□□□□□ -0.88
CHMP3-205ENST00000409810 FAM169BQ8N8A8 192 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 LRRC75AQ8NAA5 344 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 GNPDA2Q8TDQ7 276 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 NRGNQ92686 78 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 GPX7Q96SL4 187 aaPredicted RBP9.54□□□□□ -0.88
CHMP3-205ENST00000409810 KATNB1Q9BVA0 655 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 LRMDAQ9H2I8 198 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 NELFAQ9H3P2 528 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 SMURF2Q9HAU4 748 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 GRHPRQ9UBQ7 328 aa9.54□□□□□ -0.88
CHMP3-205ENST00000409810 SLC7A8Q9UHI5 535 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms