RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 NEUROG1Q92886 237 aa27.23■■□□□ 1.95
TRAF3IP1-203ENST00000409739 SLC7A6OSQ96CW6 309 aaPredicted RBP27.23■■□□□ 1.95
TRAF3IP1-203ENST00000409739 FAM46AQ96IP4 442 aaKnown RBP27.23■■□□□ 1.95
TRAF3IP1-203ENST00000409739 SEPHS2Q99611 448 aa27.23■■□□□ 1.95
TRAF3IP1-203ENST00000409739 GLTPQ9NZD2 209 aa27.23■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ARID1AO14497 2285 aa27.23■■□□□ 1.95
TRAF3IP1-203ENST00000409739 NPIPB13A6NJU9 1138 aa27.22■■□□□ 1.95
TRAF3IP1-203ENST00000409739 NPIPB4C9JG80 1138 aa27.22■■□□□ 1.95
TRAF3IP1-203ENST00000409739 IGHG1P01857 330 aa27.22■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ART1P52961 327 aa27.22■■□□□ 1.95
TRAF3IP1-203ENST00000409739 TUBA1BP68363 451 aa27.22■■□□□ 1.95
TRAF3IP1-203ENST00000409739 TUBA4AP68366 448 aa27.22■■□□□ 1.95
TRAF3IP1-203ENST00000409739 RUNX1T1Q06455 604 aa27.22■■□□□ 1.95
TRAF3IP1-203ENST00000409739 SPOCK1Q08629 439 aa27.22■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ANKDD1AQ495B1 522 aa27.22■■□□□ 1.95
TRAF3IP1-203ENST00000409739 DNAL1Q4LDG9 190 aa27.22■■□□□ 1.95
TRAF3IP1-203ENST00000409739 TUBA1AQ71U36 451 aa27.22■■□□□ 1.95
TRAF3IP1-203ENST00000409739 HDDC2Q7Z4H3 204 aa27.22■■□□□ 1.95
TRAF3IP1-203ENST00000409739 LRRC75AQ8NAA5 344 aa27.22■■□□□ 1.95
TRAF3IP1-203ENST00000409739 NOXO1Q8NFA2 376 aa27.22■■□□□ 1.95
TRAF3IP1-203ENST00000409739 OR4K5Q8NGD3 323 aa27.22■■□□□ 1.95
TRAF3IP1-203ENST00000409739 SHISA9B4DS77 424 aa27.21■■□□□ 1.95
TRAF3IP1-203ENST00000409739 GYG2O15488 501 aa27.21■■□□□ 1.95
TRAF3IP1-203ENST00000409739 GADD45GO95257 159 aa27.21■■□□□ 1.95
TRAF3IP1-203ENST00000409739 OMPP47874 163 aa27.21■■□□□ 1.95
TRAF3IP1-203ENST00000409739 LIMS1P48059 325 aa27.21■■□□□ 1.95
TRAF3IP1-203ENST00000409739 SMIM11AP58511 58 aa27.21■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ZNF672Q499Z4 452 aaPredicted RBP27.21■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ARMC4Q5T2S8 1044 aa27.21■■□□□ 1.95
TRAF3IP1-203ENST00000409739 ZNF627Q7L945 461 aa27.21■■□□□ 1.95
TRAF3IP1-203ENST00000409739 PIWIL3Q7Z3Z3 882 aaKnown RBP27.21■■□□□ 1.95
TRAF3IP1-203ENST00000409739 IGFN1Q86VF2 1251 aa27.21■■□□□ 1.95
TRAF3IP1-203ENST00000409739 TNFRSF13CQ96RJ3 184 aa27.21■■□□□ 1.95
TRAF3IP1-203ENST00000409739 TXNIPQ9H3M7 391 aa27.21■■□□□ 1.95
TRAF3IP1-203ENST00000409739 SH3PXD2BA1X283 911 aa27.2■■□□□ 1.94
TRAF3IP1-203ENST00000409739 IGHMP01871 453 aa27.2■■□□□ 1.94
TRAF3IP1-203ENST00000409739 HOXB1P14653 301 aaPredicted RBP27.2■■□□□ 1.94
TRAF3IP1-203ENST00000409739 RRM2P31350 389 aa27.2■■□□□ 1.94
TRAF3IP1-203ENST00000409739 CLRN1P58418 232 aa27.2■■□□□ 1.94
TRAF3IP1-203ENST00000409739 TOP3AQ13472 1001 aaPredicted RBP27.2■■□□□ 1.94
TRAF3IP1-203ENST00000409739 DEFB113Q30KQ7 82 aa27.2■■□□□ 1.94
TRAF3IP1-203ENST00000409739 ZNF611Q8N823 705 aa27.2■■□□□ 1.94
TRAF3IP1-203ENST00000409739 ZNF347Q96SE7 839 aa27.2■■□□□ 1.94
TRAF3IP1-203ENST00000409739 CCL19Q99731 98 aa27.2■■□□□ 1.94
TRAF3IP1-203ENST00000409739 FOXB1Q99853 325 aa27.2■■□□□ 1.94
TRAF3IP1-203ENST00000409739 FOXC2Q99958 501 aa27.2■■□□□ 1.94
TRAF3IP1-203ENST00000409739 MRPL13Q9BYD1 178 aaKnown RBP27.2■■□□□ 1.94
TRAF3IP1-203ENST00000409739 MGAT4BQ9UQ53 548 aa27.2■■□□□ 1.94
TRAF3IP1-203ENST00000409739 POFUT2Q9Y2G5 429 aa27.2■■□□□ 1.94
TRAF3IP1-203ENST00000409739 TRMUO75648 421 aaKnown RBP27.19■■□□□ 1.94
TRAF3IP1-203ENST00000409739 ACADSP16219 412 aa27.19■■□□□ 1.94
TRAF3IP1-203ENST00000409739 MAGEA2P43356 314 aa27.19■■□□□ 1.94
TRAF3IP1-203ENST00000409739 HIST3H3Q16695 136 aa27.19■■□□□ 1.94
TRAF3IP1-203ENST00000409739 LRFN4Q6PJG9 635 aa27.19■■□□□ 1.94
TRAF3IP1-203ENST00000409739 ZNF813Q6ZN06 617 aa27.19■■□□□ 1.94
TRAF3IP1-203ENST00000409739 PIAS4Q8N2W9 510 aaPredicted RBP27.19■■□□□ 1.94
TRAF3IP1-203ENST00000409739 FBXW5Q969U6 566 aa27.19■■□□□ 1.94
TRAF3IP1-203ENST00000409739 ALPK1Q96QP1 1244 aa27.19■■□□□ 1.94
TRAF3IP1-203ENST00000409739 MAGIXQ9H6Y5 334 aa27.19■■□□□ 1.94
TRAF3IP1-203ENST00000409739 STX18Q9P2W9 335 aaKnown RBP27.19■■□□□ 1.94
TRAF3IP1-203ENST00000409739 ZNF503-AS2A6NEH8 195 aa27.18■■□□□ 1.94
TRAF3IP1-203ENST00000409739 CENPBD1B2RD01 187 aa27.18■■□□□ 1.94
TRAF3IP1-203ENST00000409739 ACOT8O14734 319 aa27.18■■□□□ 1.94
TRAF3IP1-203ENST00000409739 B4GALT1P15291 398 aa27.18■■□□□ 1.94
TRAF3IP1-203ENST00000409739 ZNF26P17031 533 aaPredicted RBP27.18■■□□□ 1.94
TRAF3IP1-203ENST00000409739 CDH11P55287 796 aa27.18■■□□□ 1.94
TRAF3IP1-203ENST00000409739 CTXN1P60606 82 aa27.18■■□□□ 1.94
TRAF3IP1-203ENST00000409739 BNIP1Q12981 228 aa27.18■■□□□ 1.94
TRAF3IP1-203ENST00000409739 TAF11Q15544 211 aa27.18■■□□□ 1.94
TRAF3IP1-203ENST00000409739 ZBED5Q49AG3 693 aa27.18■■□□□ 1.94
TRAF3IP1-203ENST00000409739 SYT14Q8NB59 555 aa27.18■■□□□ 1.94
TRAF3IP1-203ENST00000409739 BTBD10Q9BSF8 475 aa27.18■■□□□ 1.94
TRAF3IP1-203ENST00000409739 CXXC4Q9H2H0 198 aa27.18■■□□□ 1.94
TRAF3IP1-203ENST00000409739 KRCC1Q9NPI7 259 aaPredicted RBP27.18■■□□□ 1.94
TRAF3IP1-203ENST00000409739 CRNNQ9UBG3 495 aaPredicted RBP27.18■■□□□ 1.94
TRAF3IP1-203ENST00000409739 QDPRP09417 244 aa27.17■■□□□ 1.94
TRAF3IP1-203ENST00000409739 PAX7P23759 505 aa27.17■■□□□ 1.94
TRAF3IP1-203ENST00000409739 RPL27P61353 136 aaKnown RBP27.17■■□□□ 1.94
TRAF3IP1-203ENST00000409739 TRAP1Q12931 704 aaKnown RBP27.17■■□□□ 1.94
TRAF3IP1-203ENST00000409739 PGM2L1Q6PCE3 622 aa27.17■■□□□ 1.94
TRAF3IP1-203ENST00000409739 IGFBPL1Q8WX77 278 aa27.17■■□□□ 1.94
TRAF3IP1-203ENST00000409739 HDAC2Q92769 488 aaKnown RBP27.17■■□□□ 1.94
TRAF3IP1-203ENST00000409739 RADILQ96JH8 1075 aa27.17■■□□□ 1.94
TRAF3IP1-203ENST00000409739 LRGUKQ96M69 825 aa27.17■■□□□ 1.94
TRAF3IP1-203ENST00000409739 SLC38A2Q96QD8 506 aa27.17■■□□□ 1.94
TRAF3IP1-203ENST00000409739 TSPAN32Q96QS1 320 aa27.17■■□□□ 1.94
TRAF3IP1-203ENST00000409739 BEX4Q9NWD9 120 aaPredicted RBP27.17■■□□□ 1.94
TRAF3IP1-203ENST00000409739 MAP1AP78559 2803 aaPredicted RBP27.17■■□□□ 1.94
TRAF3IP1-203ENST00000409739 IGHV1-18A0A0C4DH31 117 aa27.16■■□□□ 1.94
TRAF3IP1-203ENST00000409739 MYBPC1Q00872 1141 aa27.16■■□□□ 1.94
TRAF3IP1-203ENST00000409739 SLC22A25Q6T423 547 aa27.16■■□□□ 1.94
TRAF3IP1-203ENST00000409739 CCDC36Q8IYA8 594 aa27.16■■□□□ 1.94
TRAF3IP1-203ENST00000409739 PIGTQ969N2 578 aa27.16■■□□□ 1.94
TRAF3IP1-203ENST00000409739 MCHR2Q969V1 340 aa27.16■■□□□ 1.94
TRAF3IP1-203ENST00000409739 RSRC1Q96IZ7 334 aaKnown RBP27.16■■□□□ 1.94
TRAF3IP1-203ENST00000409739 ZNF346Q9UL40 294 aaKnown RBP27.16■■□□□ 1.94
TRAF3IP1-203ENST00000409739 AURKCQ9UQB9 309 aa27.16■■□□□ 1.94
TRAF3IP1-203ENST00000409739 SIGLEC7Q9Y286 467 aa27.16■■□□□ 1.94
TRAF3IP1-203ENST00000409739 USF3Q68DE3 2245 aa27.16■■□□□ 1.94
TRAF3IP1-203ENST00000409739 ITPR3Q14573 2671 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms