RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 WFIKKN1Q96NZ8 548 aa2.09□□□□□ -2.08
PMS1-203ENST00000409593 RBM14Q96PK6 669 aaKnown RBP2.09□□□□□ -2.08
PMS1-203ENST00000409593 OSBPL10Q9BXB5 764 aa2.09□□□□□ -2.08
PMS1-203ENST00000409593 RAB33BQ9H082 229 aa2.09□□□□□ -2.08
PMS1-203ENST00000409593 SMOXQ9NWM0 555 aa2.09□□□□□ -2.08
PMS1-203ENST00000409593 TMOD2Q9NZR1 351 aa2.09□□□□□ -2.08
PMS1-203ENST00000409593 TRIOBPQ9H2D6 2365 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 IGKV1D-13A0A0B4J2D9 117 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 K7EQM0 130 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 UPK3AO75631 287 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 CAPN1P07384 714 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 IGKV1-13P0DP09 117 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 NPBWR2P48146 333 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 CDK16Q00536 496 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 ELP6Q0PNE2 266 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 SYCNQ0VAF6 134 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 PRPSAP1Q14558 356 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 SFT2D3Q587I9 215 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 TRIM40Q6P9F5 258 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 BIVMQ86UB2 503 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 MMAAQ8IVH4 418 aaKnown RBP2.08□□□□□ -2.08
PMS1-203ENST00000409593 OR2T34Q8NGX1 318 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 MAGEE2Q8TD90 523 aaPredicted RBP2.08□□□□□ -2.08
PMS1-203ENST00000409593 DTNBP1Q96EV8 351 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 ZNF607Q96SK3 696 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 CHAC1Q9BUX1 264 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 SPNS1Q9H2V7 528 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 ZNRD1Q9P1U0 126 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 CGNQ9P2M7 1197 aaKnown RBP2.08□□□□□ -2.08
PMS1-203ENST00000409593 RFNGQ9Y644 331 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 MSH6P52701 1360 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 CEMIPQ8WUJ3 1361 aa2.08□□□□□ -2.08
PMS1-203ENST00000409593 H0YHG0 523 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 MGRN1O60291 552 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 GABARAPO95166 117 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 SLC25A14O95258 325 aaPredicted RBP2.07□□□□□ -2.08
PMS1-203ENST00000409593 MPZL1O95297 269 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 FABP3P05413 133 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 IQCF3P0C7M6 154 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 HSPA5P11021 654 aaKnown RBP2.07□□□□□ -2.08
PMS1-203ENST00000409593 ACAA2P42765 397 aaKnown RBP2.07□□□□□ -2.08
PMS1-203ENST00000409593 DUSP3P51452 185 aaPredicted RBP2.07□□□□□ -2.08
PMS1-203ENST00000409593 FILIP1LQ4L180 1135 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 DNLZQ5SXM8 178 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 PRR9Q5T870 116 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 ZNF493Q6ZR52 646 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 VSTM4Q8IW00 320 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 STPG2Q8N412 459 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 RGP1Q92546 391 aaPredicted RBP2.07□□□□□ -2.08
PMS1-203ENST00000409593 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.07□□□□□ -2.08
PMS1-203ENST00000409593 C16orf45Q96MC5 204 aaPredicted RBP2.07□□□□□ -2.08
PMS1-203ENST00000409593 MS4A4EQ96PG1 132 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 OSBPL11Q9BXB4 747 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 LINC00597Q9H2U6 94 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 LIN28AQ9H9Z2 209 aaKnown RBP2.07□□□□□ -2.08
PMS1-203ENST00000409593 POLE4Q9NR33 117 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 TMEM14AQ9Y6G1 99 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 DOCK8Q8NF50 2099 aa2.07□□□□□ -2.08
PMS1-203ENST00000409593 RPL36A-HNRNPH2H7BZ11 118 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 IGKV4-1P06312 121 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 RNASE2P10153 161 aaKnown RBP2.06□□□□□ -2.08
PMS1-203ENST00000409593 AK4P27144 223 aaPredicted RBP2.06□□□□□ -2.08
PMS1-203ENST00000409593 PSMA5P28066 241 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 OPRD1P41143 372 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 ATP1B3P54709 279 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 ESRRGP62508 458 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 GINS1Q14691 196 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 PDZK1Q5T2W1 519 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 ZNF684Q5T5D7 378 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 OR4F3Q6IEY1 312 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 CALHM3Q86XJ0 350 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 LGI3Q8N145 548 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 ZNF557Q8N988 423 aaPredicted RBP2.06□□□□□ -2.08
PMS1-203ENST00000409593 OR8B4Q96RC9 309 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 KIAA1257Q9ULG3 409 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 SNX6Q9UNH7 406 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 IGHV5-10-1A0A0J9YXX1 117 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 RAD51BO15315 384 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 RRP8O43159 456 aaKnown RBP2.06□□□□□ -2.08
PMS1-203ENST00000409593 LINC00869P0C866 280 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 POLR2MP0CAP2 368 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 IGHV1-8P0DP01 117 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 FOLR1P15328 257 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 NAMPTP43490 491 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 ENPP6Q6UWR7 440 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 PUSL1Q8N0Z8 303 aaKnown RBP2.06□□□□□ -2.08
PMS1-203ENST00000409593 RLN3Q8WXF3 142 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 ESR2Q92731 530 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 EMG1Q92979 244 aaKnown RBP2.06□□□□□ -2.08
PMS1-203ENST00000409593 TM4SF18Q96CE8 201 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 HSFY1Q96LI6 401 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 RPRD1AQ96P16 312 aaPredicted RBP2.06□□□□□ -2.08
PMS1-203ENST00000409593 SORT1Q99523 831 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 FOXC2Q99958 501 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 RARRES2Q99969 163 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 RMND5AQ9H871 391 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 C12orf10Q9HB07 376 aa2.06□□□□□ -2.08
PMS1-203ENST00000409593 PNPLA6Q8IY17 1366 aa2.05□□□□□ -2.08
PMS1-203ENST00000409593 BRWD3Q6RI45 1802 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms