RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 NFATC3Q12968 1075 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 GALEQ14376 348 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 C19orf48Q6RUI8 117 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 GPAT4Q86UL3 456 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 GGNQ86UU5 652 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 UEVLDQ8IX04 471 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 ALDH16A1Q8IZ83 802 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 TMEM251Q8N6I4 163 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 ZNF511Q8NB15 262 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 BCL7BQ9BQE9 202 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 TTTY10Q9BZA0 68 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 OR51E2Q9H255 320 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 RERGLQ9H628 205 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 COPS3Q9UNS2 423 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 WASF3Q9UPY6 502 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 MOKQ9UQ07 419 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 CAB39Q9Y376 341 aaPredicted RBP12.57□□□□□ -0.4
GPNMB-203ENST00000409458 IGHV3-15A0A0B4J1V0 119 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 SEC14L5O43304 696 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 AIREO43918 545 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 GPANK1O95872 356 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 CTLA4P16410 223 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 CPEP16870 476 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 TGFBR1P36897 503 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 STARP49675 285 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 BIDP55957 195 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 VBP1P61758 197 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 NCS1P62166 190 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 H3F3AP84243 136 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 PLGLB1Q02325 96 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 ZNF766Q5HY98 468 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 LIPKQ5VXJ0 399 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 FAM205BPQ63HN1 556 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 ZBTB46Q86UZ6 589 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 ERI1Q8IV48 349 aaKnown RBP12.57□□□□□ -0.4
GPNMB-203ENST00000409458 NDNFQ8TB73 568 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 DTNBP1Q96EV8 351 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 TSC22D3Q99576 134 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 EMC6Q9BV81 110 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 ISYNA1Q9NPH2 558 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 NDUFB11Q9NX14 153 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 KLHL13Q9P2N7 655 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 B9D1Q9UPM9 204 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 NOX1Q9Y5S8 564 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 FKBP7Q9Y680 259 aa12.57□□□□□ -0.4
GPNMB-203ENST00000409458 CNTRLQ7Z7A1 2325 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 IGLV1-36A0A0B4J1U3 117 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 PNMA8CA0A1B0GUJ8 204 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 TVP23AA6NH52 213 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 KLRC4-KLRK1H3BQV0 150 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 EIF1AYO14602 144 aaKnown RBP12.56□□□□□ -0.4
GPNMB-203ENST00000409458 SLC16A7O60669 478 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 OR2T7P0C7T2 308 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 POU3F2P20265 443 aaPredicted RBP12.56□□□□□ -0.4
GPNMB-203ENST00000409458 SDHBP21912 280 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 TNFSF10P50591 281 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 SUCLG1P53597 346 aaKnown RBP12.56□□□□□ -0.4
GPNMB-203ENST00000409458 CSNK2A1P68400 391 aaPredicted RBP12.56□□□□□ -0.4
GPNMB-203ENST00000409458 TMEM225Q6GV28 225 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 IGFL2Q6UWQ7 119 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 TMPRSS11AQ6ZMR5 421 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.56□□□□□ -0.4
GPNMB-203ENST00000409458 PHC2Q8IXK0 858 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 TIGD4Q8IY51 512 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 UBQLNLQ8IYU4 475 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 ZFP41Q8N8Y5 198 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 SYT14Q8NB59 555 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 OR2T27Q8NH04 317 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 ADGRG7Q96K78 797 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 FOXN4Q96NZ1 517 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 OXGR1Q96P68 337 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 UCN2Q96RP3 112 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 KCNK17Q96T54 332 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 TSPAN10Q9H1Z9 355 aaPredicted RBP12.56□□□□□ -0.4
GPNMB-203ENST00000409458 ZMIZ1Q9ULJ6 1067 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 KCNMB2Q9Y691 235 aa12.56□□□□□ -0.4
GPNMB-203ENST00000409458 SLC22A1O15245 554 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 LRRTM2O43300 516 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 CEACAM4O75871 244 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 PSKH1P11801 424 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 CLDN15P56746 228 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 RPS3AP61247 264 aaKnown RBP12.55□□□□□ -0.4
GPNMB-203ENST00000409458 FMODQ06828 376 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 ETFDHQ16134 617 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 HYAL4Q2M3T9 481 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 SOWAHCQ53LP3 525 aaPredicted RBP12.55□□□□□ -0.4
GPNMB-203ENST00000409458 HBMQ6B0K9 141 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 KLBQ86Z14 1044 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 ZFP62Q8NB50 900 aaPredicted RBP12.55□□□□□ -0.4
GPNMB-203ENST00000409458 UFD1Q92890 307 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 C4orf36Q96KX1 117 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 SLC6A15Q9H2J7 730 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 CXorf56Q9H5V9 222 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 RASD1Q9Y272 281 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 PCDHGB7Q9Y5F8 929 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 LOC400499M0QZD8 3231 aa12.55□□□□□ -0.4
GPNMB-203ENST00000409458 IGKV1D-43A0A0B4J1Z2 117 aa12.54□□□□□ -0.4
GPNMB-203ENST00000409458 LOC100506127A0A0U1RQW1 187 aa12.54□□□□□ -0.4
GPNMB-203ENST00000409458 EIF1BO60739 113 aaKnown RBP12.54□□□□□ -0.4
GPNMB-203ENST00000409458 ZNF182P17025 639 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms