RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 TMEM200AQ86VY9 491 aa11.85□□□□□ -0.51
PTPRN-202ENST00000409251 CCDC36Q8IYA8 594 aa11.85□□□□□ -0.51
PTPRN-202ENST00000409251 SVBPQ8N300 66 aa11.85□□□□□ -0.51
PTPRN-202ENST00000409251 INO80EQ8NBZ0 244 aaPredicted RBP11.85□□□□□ -0.51
PTPRN-202ENST00000409251 SMRP1Q8NCR6 262 aa11.85□□□□□ -0.51
PTPRN-202ENST00000409251 GIMAP5Q96F15 307 aa11.85□□□□□ -0.51
PTPRN-202ENST00000409251 POFUT1Q9H488 388 aa11.85□□□□□ -0.51
PTPRN-202ENST00000409251 CTSFQ9UBX1 484 aa11.85□□□□□ -0.51
PTPRN-202ENST00000409251 KLF15Q9UIH9 416 aa11.85□□□□□ -0.51
PTPRN-202ENST00000409251 A0A0G2JK05 382 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 A0A1W2PPV9 198 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 OR6C76A6NM76 312 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 PRAF2O60831 178 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 SEMA4FO95754 770 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 CTSBP07858 339 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 CSNK2A2P19784 350 aaPredicted RBP11.84□□□□□ -0.51
PTPRN-202ENST00000409251 SIRPAP78324 504 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 CTAG1AP78358 180 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 AMZ1Q400G9 498 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 OR2W3Q7Z3T1 314 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 KLHDC8AQ8IYD2 350 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 LINC00471Q8N535 108 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 TMEM239Q8WW34 195 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 CNRIP1Q96F85 164 aaPredicted RBP11.84□□□□□ -0.51
PTPRN-202ENST00000409251 LMAN2LQ9H0V9 348 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 WDR13Q9H1Z4 485 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 FBXO34Q9NWN3 711 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 AUP1Q9Y679 476 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 V9GY05 133 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 C17orf113A0A1B0GUU1 675 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 MED19A0JLT2 244 aaPredicted RBP11.84□□□□□ -0.51
PTPRN-202ENST00000409251 PLRG1O43660 514 aaKnown RBP11.84□□□□□ -0.51
PTPRN-202ENST00000409251 OR2T1O43869 369 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 FBXO24O75426 580 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 DMRTC1Q5HYR2 192 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 UBE2NLQ5JXB2 153 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 ZNF793Q6ZN11 406 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 TTLL10Q6ZVT0 673 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 PRSS41Q7RTY9 318 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 KRT77Q7Z794 578 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 PELI1Q96FA3 418 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 BCL2L14Q9BZR8 327 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 LMAN1LQ9HAT1 526 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 RPS10P5Q9NQ39 176 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 GSKIPQ9P0R6 139 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 MIOXQ9UGB7 285 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 PURGQ9UJV8 347 aaKnown RBP11.84□□□□□ -0.51
PTPRN-202ENST00000409251 CTNSO60931 367 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 WDPCPO95876 746 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 HLA-AP01891 365 aaKnown RBP11.84□□□□□ -0.51
PTPRN-202ENST00000409251 SNRNP70P08621 437 aaKnown RBP11.84□□□□□ -0.51
PTPRN-202ENST00000409251 ZGLP1P0C6A0 271 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 CNR1P21554 472 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 TAS2R20P59543 309 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 FUT5Q11128 374 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 BAMBIQ13145 260 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 ADAM5Q6NVV9 412 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 GLB1L2Q8IW92 636 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 TLNRD1Q9H1K6 362 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 SLC38A1Q9H2H9 487 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 ANKRD19PQ9H560 264 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 OBP2AQ9NY56 170 aa11.84□□□□□ -0.51
PTPRN-202ENST00000409251 A0A0A6YYC8 382 aaPredicted RBP11.83□□□□□ -0.52
PTPRN-202ENST00000409251 FITM1A5D6W6 292 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 I3L1I5 382 aaPredicted RBP11.83□□□□□ -0.52
PTPRN-202ENST00000409251 MAN2B1O00754 1011 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 AVPR2P30518 371 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 PTGFRP43088 359 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 PRDX1Q06830 199 aaKnown RBP11.83□□□□□ -0.52
PTPRN-202ENST00000409251 AIMP2Q13155 320 aaKnown RBP11.83□□□□□ -0.52
PTPRN-202ENST00000409251 PON3Q15166 354 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 AVPI1Q5T686 147 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 OR4C11Q6IEV9 310 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 ZNF765Q7L2R6 523 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 TPRA1Q86W33 373 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 SEMA6DQ8NFY4 1073 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 FAM46BQ96A09 425 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 PFDN5Q99471 154 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 TMEM74BQ9NUR3 256 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 TAS2R5Q9NYW4 299 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 PRR13Q9NZ81 148 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 MED31Q9Y3C7 131 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 AHCTF1Q8WYP5 2266 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 ABCD4O14678 606 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 ST6GAL1P15907 406 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 BSGP35613 385 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 NRG3P56975 720 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 ADAM8P78325 824 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 ZNF85Q03923 595 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 GPR18Q14330 331 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 MAPK14Q16539 360 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 PLEKHN1Q494U1 663 aaPredicted RBP11.83□□□□□ -0.52
PTPRN-202ENST00000409251 RNF165Q6ZSG1 346 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 RANBP3LQ86VV4 465 aaPredicted RBP11.83□□□□□ -0.52
PTPRN-202ENST00000409251 LNX2Q8N448 690 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 ZNF485Q8NCK3 441 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 OR5T3Q8NGG3 340 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 RXFP4Q8TDU9 374 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 DIO2Q92813 273 aa11.83□□□□□ -0.52
PTPRN-202ENST00000409251 IL20Q9NYY1 176 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms