RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 RSPO3Q9BXY4 272 aaPredicted RBP7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 NSRP1Q9H0G5 558 aaKnown RBP7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 KCNN2Q9H2S1 579 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 PLK3Q9H4B4 646 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 GLTPQ9NZD2 209 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 SLC7A8Q9UHI5 535 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 GPR160Q9UJ42 338 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 MED31Q9Y3C7 131 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 CMAHPQ9Y471 501 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 VPS13CQ709C8 3753 aa7.89□□□□□ -1.15
SNORD88A-201ENST00000408314 JMJD1CQ15652 2540 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 ZANQ9Y493 2812 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 IGHV4-30-2A0A087WSY4 118 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 IGHV2OR16-5A0A0B4J2B6 119 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 LOC100653049A0A140TA62 436 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 NPIPB13A6NJU9 1138 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 A8MV72 311 aaPredicted RBP7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 NPIPB4C9JG80 1138 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 hCG_2039718K7EN88 272 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 GSTA4O15217 222 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 DHHO43323 396 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 ATP8B1O43520 1251 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 CRLF1O75462 422 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 GMNNO75496 209 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 KRT34O76011 436 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 OR7A10O76100 309 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 IFNW1P05000 195 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 USF1P22415 310 aaPredicted RBP7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 KDELR2P33947 212 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 EVX1P49640 407 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 GZMKP49863 264 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 CLRN1P58418 232 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 SELENOVP59797 346 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 SELENOWP63302 87 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 VLDLRP98155 873 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 GUCY1A3Q02108 690 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 CYBRD1Q53TN4 286 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 GKAP1Q5VSY0 366 aaPredicted RBP7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 FAM205BPQ63HN1 556 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 UGT2A3Q6UWM9 527 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 UNQ6126/PRO20091Q6UXV3 157 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 CYP4Z1Q86W10 505 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 RBM45Q8IUH3 476 aaKnown RBP7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 ZNF525Q8N782 197 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 NOXO1Q8NFA2 376 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 OR1J2Q8NGS2 313 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 C10orf105Q8TEF2 133 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 TMEM54Q969K7 222 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 TXNDC15Q96J42 360 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 TPD52L3Q96J77 140 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 ZNF583Q96ND8 569 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 TNFRSF13CQ96RJ3 184 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 WFDC6Q9BQY6 131 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 LRMDAQ9H2I8 198 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 EFCAB1Q9HAE3 211 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 SMURF2Q9HAU4 748 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 NOX3Q9HBY0 568 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 YAE1D1Q9NRH1 226 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 INIPQ9NRY2 104 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 LPAR3Q9UBY5 353 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 RIMS3Q9UJD0 308 aa7.88□□□□□ -1.15
SNORD88A-201ENST00000408314 IQCMA0A1B0GVH7 501 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 LRRN3E7EW58 273 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 BLOC1S5-TXNDC5H3BN57 136 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 SYNGR3O43761 229 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 SEC14L2O76054 403 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 LYPD3O95274 346 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 HLA-HP01893 362 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 PGA4P0DJD7 388 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 PGA3P0DJD8 388 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 FUT1P19526 365 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 NR4A1P22736 598 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 CALCRP30988 508 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 GLRXP35754 106 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 MDH1P40925 334 aaKnown RBP7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 GUCA1AP43080 201 aaPredicted RBP7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 GIPRP48546 466 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 PTDSS1P48651 473 aaKnown RBP7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 RAB1AP62820 205 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 PLP2Q04941 152 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 TMEM249Q2WGJ8 235 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 CHRFAM7AQ494W8 412 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 CGB2Q6NT52 195 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 HACD2Q6Y1H2 254 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 WDR88Q6ZMY6 472 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 RRM2BQ7LG56 351 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 SPATA21Q7Z572 469 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 CDK20Q8IZL9 346 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 OFCC1Q8IZS5 231 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 SLC22A24Q8N4F4 322 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 OR4D11Q8NGI4 311 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 LIPHQ8WWY8 451 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 GEMIN6Q8WXD5 167 aaKnown RBP7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 RCN3Q96D15 328 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 CMTM5Q96DZ9 223 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 ZNF837Q96EG3 531 aaPredicted RBP7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 SORCS2Q96PQ0 1159 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 PRSS27Q9BQR3 290 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 FNDC11Q9BVV2 318 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 MS4A5Q9H3V2 200 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms