RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 OR51V1Q9H2C8 321 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 RNF122Q9H9V4 155 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 BCO1Q9HAY6 547 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 AMBNQ9NP70 447 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 RCE1Q9Y256 329 aa18.18■□□□□ 0.5
CHKB-201ENST00000406938 SVILO95425 2214 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 SLC22A23A1A5C7 686 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 SH3D21A4FU49 640 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 FIGNL2A6NMB9 653 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 ZNF726A6NNF4 738 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 AKAP8O43823 692 aaKnown RBP18.17■□□□□ 0.5
CHKB-201ENST00000406938 WDR1O75083 606 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 EDN3P14138 238 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 GABRA1P14867 456 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 NTF4P34130 210 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 SELENOPP49908 381 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 CDH11P55287 796 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 CLRN1P58418 232 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 CXCR4P61073 352 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 RPTNQ6XPR3 784 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 TMEM123Q8N131 208 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 CPT1CQ8TCG5 803 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 RHNO1Q9BSD3 238 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 ASB6Q9NWX5 421 aa18.17■□□□□ 0.5
CHKB-201ENST00000406938 ZNF724A8MTY0 619 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 DCTN6O00399 190 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 FAM20BO75063 409 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 ZNF432O94892 652 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 SPI1P17947 270 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 SLC2A5P22732 501 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 SLC25A1P53007 311 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 ZNF91Q05481 1191 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 APOFQ13790 326 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 SF3B4Q15427 424 aaKnown RBP eCLIP18.16■□□□□ 0.51e-11■■■■□ 21.2
CHKB-201ENST00000406938 KLHL12Q53G59 568 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 RBM48Q5RL73 367 aaKnown RBP18.16■□□□□ 0.5
CHKB-201ENST00000406938 NSUN5P2Q63ZY6 315 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 GTF2IRD2BQ6EKJ0 949 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 GTF2IRD2Q86UP8 949 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 WNT2BQ93097 391 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 RFKQ969G6 155 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 TMEM45BQ96B21 275 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 ALG12Q9BV10 488 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 CALHM2Q9HA72 323 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 H2AFY2Q9P0M6 372 aaPredicted RBP18.16■□□□□ 0.5
CHKB-201ENST00000406938 MYRFQ9Y2G1 1151 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 NOSIPQ9Y314 301 aaKnown RBP18.16■□□□□ 0.5
CHKB-201ENST00000406938 CD8B2A6NJW9 211 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 M0R3G1 203 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 SLC19A2O60779 497 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 TNFAIP8O95379 198 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 YES1P07947 543 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 RPSAP08865 295 aaKnown RBP18.16■□□□□ 0.5
CHKB-201ENST00000406938 CCDC159P0C7I6 412 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 CRHBPP24387 322 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 PTGER4P35408 488 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 RPS7P62081 194 aaKnown RBP18.16■□□□□ 0.5
CHKB-201ENST00000406938 FMODQ06828 376 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 RTL6Q6ICC9 239 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 AAED1Q7RTV5 226 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 OR6V1Q8N148 313 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 C9orf106Q8NAJ2 232 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 OR51L1Q8NGJ5 315 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 KISS1RQ969F8 398 aaPredicted RBP18.16■□□□□ 0.5
CHKB-201ENST00000406938 NUAK2Q9H093 628 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.16■□□□□ 0.5
CHKB-201ENST00000406938 ZNF835Q9Y2P0 537 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 FAM215AQ9Y5M1 114 aa18.16■□□□□ 0.5
CHKB-201ENST00000406938 CCDC182A6NF36 153 aa18.15■□□□□ 0.5
CHKB-201ENST00000406938 SNTNA6NMZ2 147 aa18.15■□□□□ 0.5
CHKB-201ENST00000406938 PRRG2O14669 202 aa18.15■□□□□ 0.5
CHKB-201ENST00000406938 AHCYL1O43865 530 aa18.15■□□□□ 0.5
CHKB-201ENST00000406938 DBTP11182 482 aaKnown RBP18.15■□□□□ 0.5
CHKB-201ENST00000406938 CTLA4P16410 223 aa18.15■□□□□ 0.5
CHKB-201ENST00000406938 HTR1FP30939 366 aa18.15■□□□□ 0.5
CHKB-201ENST00000406938 C1orf185Q5T7R7 199 aa18.15■□□□□ 0.5
CHKB-201ENST00000406938 MEPCEQ7L2J0 689 aaKnown RBP18.15■□□□□ 0.5
CHKB-201ENST00000406938 GCNT2Q8N0V5 402 aa18.15■□□□□ 0.5
CHKB-201ENST00000406938 PROKR2Q8NFJ6 384 aa18.15■□□□□ 0.5
CHKB-201ENST00000406938 OR2T4Q8NH00 348 aa18.15■□□□□ 0.5
CHKB-201ENST00000406938 ZNRF4Q8WWF5 429 aa18.15■□□□□ 0.5
CHKB-201ENST00000406938 GMPPAQ96IJ6 420 aaPredicted RBP18.15■□□□□ 0.5
CHKB-201ENST00000406938 RERGLQ9H628 205 aa18.15■□□□□ 0.5
CHKB-201ENST00000406938 GP6Q9HCN6 339 aa18.15■□□□□ 0.5
CHKB-201ENST00000406938 SRA1Q9HD15 236 aaKnown RBP18.15■□□□□ 0.5
CHKB-201ENST00000406938 PLCXD1Q9NUJ7 323 aa18.15■□□□□ 0.5
CHKB-201ENST00000406938 CENPBD1B2RD01 187 aa18.14■□□□□ 0.49
CHKB-201ENST00000406938 ATXN7O15265 892 aaPredicted RBP18.14■□□□□ 0.49
CHKB-201ENST00000406938 SLC16A7O60669 478 aa18.14■□□□□ 0.49
CHKB-201ENST00000406938 AGTR1P30556 359 aa18.14■□□□□ 0.49
CHKB-201ENST00000406938 PYCR1P32322 319 aa18.14■□□□□ 0.49
CHKB-201ENST00000406938 CSNK1A1P48729 337 aa18.14■□□□□ 0.49
CHKB-201ENST00000406938 CSNK2BP67870 215 aa18.14■□□□□ 0.49
CHKB-201ENST00000406938 RBPJQ06330 500 aa18.14■□□□□ 0.49
CHKB-201ENST00000406938 HIST3H3Q16695 136 aa18.14■□□□□ 0.49
CHKB-201ENST00000406938 B3GLCTQ6Y288 498 aa18.14■□□□□ 0.49
CHKB-201ENST00000406938 C3P1Q6ZMU1 363 aa18.14■□□□□ 0.49
CHKB-201ENST00000406938 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.14■□□□□ 0.49
CHKB-201ENST00000406938 NMD3Q96D46 503 aaKnown RBP18.14■□□□□ 0.49
CHKB-201ENST00000406938 YTHDF1Q9BYJ9 559 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms