RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 HPRP00739 348 aa18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 LYNX1P0DP58 116 aa18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 ROR2Q01974 943 aaKnown RBP18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 MS4A18Q3C1V0 323 aa18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 C3orf36Q3SXR2 165 aa18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 ZNF613Q6PF04 617 aa18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 LINC00114Q6XXX2 140 aa18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 PCYOX1LQ8NBM8 494 aa18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 ZMYND19Q96E35 227 aaPredicted RBP18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 TMEM43Q9BTV4 400 aa18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 NARFLQ9H6Q4 476 aa18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 SEC61A2Q9H9S3 476 aa18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 LPAR2Q9HBW0 351 aa18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 GID8Q9NWU2 228 aa18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 CRNNQ9UBG3 495 aaPredicted RBP18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 GRIP1Q9Y3R0 1128 aa18.21■□□□□ 0.51
RHBDD3-202ENST00000406335 MALRD1Q5VYJ5 2156 aa18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 ATP8B1O43520 1251 aa18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 CHP2O43745 196 aa18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 ZNF432O94892 652 aa18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 HLA-DOBP13765 273 aa18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 HOXB1P14653 301 aaPredicted RBP18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 TNFRSF1BP20333 461 aa18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 HGFACQ04756 655 aa18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 SWT1Q5T5J6 900 aaKnown RBP18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 OR6S1Q8NH40 331 aa18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 MAGEE2Q8TD90 523 aaPredicted RBP18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 ADAMTS16Q8TE57 1224 aa18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 ZFAND2BQ8WV99 257 aa18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 SLC41A3Q96GZ6 507 aa18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 EPYCQ99645 322 aa18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 CRLF2Q9HC73 371 aa18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 GMPR2Q9P2T1 348 aaKnown RBP18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 CMAHPQ9Y471 501 aa18.2■□□□□ 0.5
RHBDD3-202ENST00000406335 SLC22A2O15244 555 aa18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 TRAF3IP2O43734 574 aaPredicted RBP18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 CELA3BP08861 270 aa18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 NQO1P15559 274 aaKnown RBP18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 CBR1P16152 277 aa18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 SH3BGRP55822 239 aaPredicted RBP18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 C1DQ13901 141 aaKnown RBP18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 DAG1Q14118 895 aa18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 KRT80Q6KB66 452 aa18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 THSD4Q6ZMP0 1018 aa18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 CDK20Q8IZL9 346 aa18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 C10orf53Q8N6V4 93 aa18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 ADPRHL1Q8NDY3 354 aa18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 SGMS2Q8NHU3 365 aa18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 LINC00470Q9BZP3 86 aa18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 SLC7A7Q9UM01 511 aa18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 NOX1Q9Y5S8 564 aa18.19■□□□□ 0.5
RHBDD3-202ENST00000406335 SHOX2O60902 331 aaPredicted RBP18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 IGLV1-44P01699 117 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 COX4I1P13073 169 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 ARR3P36575 388 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 GPR6P46095 362 aaPredicted RBP18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 ARF1P84077 181 aaKnown RBP18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 SNTB2Q13425 540 aaKnown RBP18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 RIN1Q13671 783 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 MFSD13AQ14CX5 517 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 ERICH5Q6P6B1 374 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 CARM1Q86X55 608 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 TREML1Q86YW5 311 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 WDFY1Q8IWB7 410 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 GPR137CQ8N3F9 429 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 FAM169BQ8N8A8 192 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 RP9Q8TA86 221 aaKnown RBP18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 ASPNQ9BXN1 380 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 PCDHAC1Q9H158 963 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 HIF1ANQ9NWT6 349 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 CMTM6Q9NX76 183 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 REV1Q9UBZ9 1251 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 RCE1Q9Y256 329 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 SH3GLB1Q9Y371 365 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 CORINQ9Y5Q5 1042 aa18.18■□□□□ 0.5
RHBDD3-202ENST00000406335 LOC102725191A0A1B0GVB3 256 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 TRAPPC13A5PLN9 417 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 FAM220BPB1ANY3 271 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 TRIM77I1YAP6 450 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 IGKV3-15P01624 115 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 TCN1P20061 433 aaPredicted RBP18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 SEC24CP53992 1094 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 PMS2P3Q13401 168 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 FAHD2BQ6P2I3 314 aaPredicted RBP18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 NHLRC1Q6VVB1 395 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 UEVLDQ8IX04 471 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 SCAIQ8N9R8 606 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 IL17RDQ8NFM7 739 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 RASSF5Q8WWW0 418 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 TMEM186Q96B77 213 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 ZNF837Q96EG3 531 aaPredicted RBP18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 FAHD2AQ96GK7 314 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 OR2M2Q96R28 347 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 ELAC2Q9BQ52 826 aaKnown RBP18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 EMC6Q9BV81 110 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 NELFAQ9H3P2 528 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 MRPL39Q9NYK5 338 aaKnown RBP18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 PCDHB10Q9UN67 800 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 SPEF1Q9Y4P9 236 aa18.17■□□□□ 0.5
RHBDD3-202ENST00000406335 IGHV2OR16-5A0A0B4J2B6 119 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms