RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SULT2B1O00204 365 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 SAP18O00422 153 aaKnown RBP3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 B4GALT5O43286 388 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 PSTPIP1O43586 416 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 OR10H3O60404 316 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 ZNF253O75346 499 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 SCRG1O75711 98 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 LSM8O95777 96 aaKnown RBP3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 LALBAP00709 142 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 TNNC2P02585 160 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 CALB1P05937 261 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 MCF2P10911 925 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 COX5AP20674 150 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 CCNCP24863 283 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 IVDP26440 423 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 ADORA2BP29275 332 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 EPHX2P34913 555 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 SLC8A3P57103 927 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 YWHAEP62258 255 aaKnown RBP3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 CCNA1P78396 465 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 TFAMQ00059 246 aaKnown RBP3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 BEX3Q00994 111 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 CAV1Q03135 178 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 IFFO1Q0D2I5 559 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 KLRB1Q12918 225 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 RUNX3Q13761 415 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 PIGHQ14442 188 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 PPP1R7Q15435 360 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 KCTD19Q17RG1 926 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 C14orf177Q52M58 125 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 FAM199XQ6PEV8 388 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 GSG1LQ6UXU4 331 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 DNM1P46Q6ZS02 220 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 H2BFWTQ7Z2G1 175 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 CROCCP2Q86T23 111 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 FAM228AQ86W67 206 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 EGFL6Q8IUX8 553 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 FBXO16Q8IX29 292 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 KATNAL2Q8IYT4 538 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 BBS5Q8N3I7 341 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 TMEM35BQ8NCS4 154 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 C1orf54Q8WWF1 131 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 TLCD1Q96CP7 247 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 CELF6Q96J87 481 aaKnown RBP3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 SLC38A2Q96QD8 506 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 MCHR1Q99705 422 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 C11orf70Q9BRQ4 267 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 CHRDL1Q9BU40 450 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 TMEM109Q9BVC6 243 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 ROPN1BQ9BZX4 212 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 LHX5Q9H2C1 402 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 CENPHQ9H3R5 247 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 GLIPR2Q9H4G4 154 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 POPDC2Q9HBU9 364 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 POLE4Q9NR33 117 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 CISHQ9NSE2 258 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 PARVAQ9NVD7 372 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 PAK1IP1Q9NWT1 392 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 SPATA7Q9P0W8 599 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 MTRF1LQ9UGC7 380 aaKnown RBP3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 RSPH14Q9UHP6 348 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 RIMS3Q9UJD0 308 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 PLLPQ9Y342 182 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 IFT52Q9Y366 437 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 PPIAL4AQ9Y536 164 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 N6AMT1Q9Y5N5 214 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 FLVCR1Q9Y5Y0 555 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 MYH8P13535 1937 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 FER1L6Q2WGJ9 1857 aa3.69□□□□□ -1.82
HMGB3P18-201ENST00000406327 PPIAL4EA0A075B759 164 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 GMNCA6NCL1 334 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 SIGLEC16A6NMB1 481 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 ZNF716A6NP11 495 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 F8VP50 259 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 PI15O43692 258 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 RAMP3O60896 148 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 GPX5O75715 221 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 DUSP14O95147 198 aaKnown RBP3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 SNAI1O95863 264 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 AGTP01019 485 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 SHBGP04278 402 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 PAEPP09466 180 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 ZNF735P0CB33 412 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 PPIAL4FP0DN26 164 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 CCR1P32246 355 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 GCKP35557 465 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 DUSP3P51452 185 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 SLC25A1P53007 311 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 IST1P53990 364 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 ATP1B3P54709 279 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 MAGOHP61326 146 aaKnown RBP3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 PAX2Q02962 417 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 KYAT1Q16773 422 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 KRT71Q3SY84 523 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 TMEM52BQ4KMG9 183 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 SLC22A6Q4U2R8 563 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 SLC22A10Q63ZE4 541 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 TTC19Q6DKK2 380 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 UFSP1Q6NVU6 142 aa3.68□□□□□ -1.82
HMGB3P18-201ENST00000406327 DNAJC24Q6P3W2 148 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms