RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CDKN1BP46527 198 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 CSNK1EP49674 416 aaKnown RBP3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 GDI2P50395 445 aaKnown RBP3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 TGFBIQ15582 683 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 SLC1A5Q15758 541 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 PARP15Q460N3 678 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 CTRB2Q6GPI1 263 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 FRA10AC1Q70Z53 315 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 EIF3MQ7L2H7 374 aaKnown RBP3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 RDH10Q8IZV5 341 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 CADM2Q8N3J6 435 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 FBXL16Q8N461 479 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 FTMTQ8N4E7 242 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 ZNF680Q8NEM1 530 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 TTLQ8NG68 377 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 ZNF461Q8TAF7 563 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 PYROXD1Q8WU10 500 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 ISG20Q96AZ6 181 aaKnown RBP3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 FGGYQ96C11 551 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 DNTTIP1Q9H147 329 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 C12orf10Q9HB07 376 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 PDP1Q9P0J1 537 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 STX18Q9P2W9 335 aaKnown RBP3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 APOBEC3BQ9UH17 382 aaKnown RBP3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 DCDC2Q9UHG0 476 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 TBC1D24Q9ULP9 559 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 UBQLN1Q9UMX0 589 aaKnown RBP3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 PACSIN2Q9UNF0 486 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 FLVCR1Q9Y5Y0 555 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 BZW2Q9Y6E2 419 aaKnown RBP3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 TP53BP1Q12888 1972 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 PHF3Q92576 2039 aaKnown RBP3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 CDHR2Q9BYE9 1310 aa3.68□□□□□ -1.82
HMGB1P13-201ENST00000406019 NSG1A0A0A6YYJ2 146 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 A0A1W2PQ72 361 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 TMEM120BA0PK00 339 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 E7ENQ6 273 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 MBTPS2O43462 519 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 CHST1O43916 411 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 SEMG1P04279 462 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 OR8U8P0C7N1 319 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 SHC1P29353 583 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 SHMT2P34897 504 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 ATP5C1P36542 298 aaKnown RBP3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 NSG1P42857 185 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 RPS5P46782 204 aaKnown RBP3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 GSSP48637 474 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 HSPA13P48723 471 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 FBXW4P57775 412 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 TLE4Q04727 773 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 EGFEM1PQ0D2K5 195 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 Q1RN00 199 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 TCTEX1D4Q5JR98 221 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 SAMD4BQ5PRF9 694 aaKnown RBP3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 LY6G6FQ5SQ64 297 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 PIP5KL1Q5T9C9 394 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 ZNF658Q5TYW1 1059 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 RNLSQ5VYX0 342 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 SPINK14Q6IE38 97 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 UNQ9370/PRO34162Q6UXP9 181 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 SSX9Q7RTT3 188 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 PRSS41Q7RTY9 318 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 C10orf67Q8IYJ2 551 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 GABRG1Q8N1C3 465 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 MS4A15Q8N5U1 240 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 OR52I1Q8NGK6 324 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 OR13F1Q8NGS4 319 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 CCDC12Q8WUD4 166 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 FGF11Q92914 225 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 CMTM7Q96FZ5 175 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 MS4A4EQ96PG1 132 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 CGREF1Q99674 301 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 PAXXQ9BUH6 204 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 SELENOIQ9C0D9 397 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 MRPS30Q9NP92 439 aaKnown RBP3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 GIN1Q9NXP7 522 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 PEF1Q9UBV8 284 aaKnown RBP3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 SMAD5-AS1Q9Y6J3 95 aa3.67□□□□□ -1.82
HMGB1P13-201ENST00000406019 LRRK1Q38SD2 2015 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 ADCY9O60503 1353 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 ROCK2O75116 1388 aaKnown RBP3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 USP47Q96K76 1375 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 ANKRD30AQ9BXX3 1397 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 SUPT3HB4E1H0 165 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 WWP2O00308 870 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 GPR171O14626 319 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 LYPLA1O75608 230 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 CRTAPO75718 401 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 IGHV2-5P01817 119 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 ERCC1P07992 297 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 CLTAP09496 248 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 ABOP16442 354 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 HOXB8P17481 243 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 TBPP20226 339 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 GDF1P27539 372 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 ALDH3A1P30838 453 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 LCN1P31025 176 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 UGT1A3P35503 534 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 MDH2P40926 338 aaKnown RBP3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 KIR2DS4P43632 304 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms