RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 TBC1D23Q9NUY8 699 aa25.87■■□□□ 1.73
USP42-202ENST00000404008 IER3IP1Q9Y5U9 82 aa25.87■■□□□ 1.73
USP42-202ENST00000404008 CENPBD1B2RD01 187 aa25.86■■□□□ 1.73
USP42-202ENST00000404008 TRMUO75648 421 aaKnown RBP25.86■■□□□ 1.73
USP42-202ENST00000404008 KRT33AO76009 404 aa25.86■■□□□ 1.73
USP42-202ENST00000404008 OSMP13725 252 aa25.86■■□□□ 1.73
USP42-202ENST00000404008 COX5AP20674 150 aa25.86■■□□□ 1.73
USP42-202ENST00000404008 IGHV1-2P23083 117 aa25.86■■□□□ 1.73
USP42-202ENST00000404008 CSNK1A1P48729 337 aa25.86■■□□□ 1.73
USP42-202ENST00000404008 RPS6KA3P51812 740 aa25.86■■□□□ 1.73
USP42-202ENST00000404008 PPP2R2BQ00005 443 aa25.86■■□□□ 1.73
USP42-202ENST00000404008 SLC36A3Q495N2 470 aa25.86■■□□□ 1.73
USP42-202ENST00000404008 STAC2Q6ZMT1 411 aa25.86■■□□□ 1.73
USP42-202ENST00000404008 CXorf67Q86X51 503 aaPredicted RBP25.86■■□□□ 1.73
USP42-202ENST00000404008 NOXO1Q8NFA2 376 aa25.86■■□□□ 1.73
USP42-202ENST00000404008 HDAC2Q92769 488 aaKnown RBP25.86■■□□□ 1.73
USP42-202ENST00000404008 KCNK17Q96T54 332 aa25.86■■□□□ 1.73
USP42-202ENST00000404008 OSBPL10Q9BXB5 764 aa25.86■■□□□ 1.73
USP42-202ENST00000404008 A1L4Q6 167 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 A6NIZ1 184 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 ZNF587BE7ETH6 402 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 C19orf84I3L1E1 186 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 M0R3G1 203 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 BHLHE40O14503 412 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 ARPC3O15145 178 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 TXNDC12O95881 172 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 CLRN1P58418 232 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 RAP1BP61224 184 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 RAP1AP62834 184 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 HIST3H3Q16695 136 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 MESTQ5EB52 335 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 ABHD12BQ7Z5M8 362 aaPredicted RBP25.85■■□□□ 1.73
USP42-202ENST00000404008 PARP8Q8N3A8 854 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 OR6N1Q8NGY5 312 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 MAGEE2Q8TD90 523 aaPredicted RBP25.85■■□□□ 1.73
USP42-202ENST00000404008 RASD2Q96D21 266 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 ERMAPQ96PL5 475 aaPredicted RBP25.85■■□□□ 1.73
USP42-202ENST00000404008 TSSK6Q9BXA6 273 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 KRT84Q9NSB2 600 aa25.85■■□□□ 1.73
USP42-202ENST00000404008 TEX13CA0A0J9YWL9 993 aa25.84■■□□□ 1.73
USP42-202ENST00000404008 H3BN98 237 aa25.84■■□□□ 1.73
USP42-202ENST00000404008 RPL36A-HNRNPH2H7BZ11 118 aa25.84■■□□□ 1.73
USP42-202ENST00000404008 IMPA2O14732 288 aa25.84■■□□□ 1.73
USP42-202ENST00000404008 ITGA5P08648 1049 aa25.84■■□□□ 1.73
USP42-202ENST00000404008 UGT2B10P36537 528 aa25.84■■□□□ 1.73
USP42-202ENST00000404008 FOXG1P55316 489 aaPredicted RBP25.84■■□□□ 1.73
USP42-202ENST00000404008 ITGADQ13349 1161 aa25.84■■□□□ 1.73
USP42-202ENST00000404008 SFRP5Q5T4F7 317 aa25.84■■□□□ 1.73
USP42-202ENST00000404008 SYT14Q8NB59 555 aa25.84■■□□□ 1.73
USP42-202ENST00000404008 PSMG3-AS1Q96PY0 264 aa25.84■■□□□ 1.73
USP42-202ENST00000404008 RBM4BQ9BQ04 359 aaKnown RBP25.84■■□□□ 1.73
USP42-202ENST00000404008 RBM4Q9BWF3 364 aaKnown RBP25.84■■□□□ 1.73
USP42-202ENST00000404008 DCLRE1BQ9H816 532 aa25.84■■□□□ 1.73
USP42-202ENST00000404008 GPR35Q9HC97 309 aa25.84■■□□□ 1.73
USP42-202ENST00000404008 B3GAT2Q9NPZ5 323 aa25.84■■□□□ 1.73
USP42-202ENST00000404008 TAS2R16Q9NYV7 291 aa25.84■■□□□ 1.73
USP42-202ENST00000404008 GLTPQ9NZD2 209 aa25.84■■□□□ 1.73
USP42-202ENST00000404008 TMEFF2Q9UIK5 374 aaPredicted RBP25.84■■□□□ 1.73
USP42-202ENST00000404008 SPTAN1Q13813 2472 aaKnown RBP25.84■■□□□ 1.73
USP42-202ENST00000404008 PRSS44E7EML9 344 aa25.83■■□□□ 1.73
USP42-202ENST00000404008 H0YHG0 523 aa25.83■■□□□ 1.73
USP42-202ENST00000404008 PSMB1P20618 241 aaKnown RBP25.83■■□□□ 1.73
USP42-202ENST00000404008 MPGP29372 298 aa25.83■■□□□ 1.73
USP42-202ENST00000404008 CCKARP32238 428 aa25.83■■□□□ 1.73
USP42-202ENST00000404008 SORDQ00796 357 aa25.83■■□□□ 1.73
USP42-202ENST00000404008 ROR2Q01974 943 aaKnown RBP25.83■■□□□ 1.73
USP42-202ENST00000404008 KRR1Q13601 381 aaKnown RBP25.83■■□□□ 1.73
USP42-202ENST00000404008 TEX47Q8TBZ9 253 aa25.83■■□□□ 1.73
USP42-202ENST00000404008 CRLF2Q9HC73 371 aa25.83■■□□□ 1.73
USP42-202ENST00000404008 SOCS2O14508 198 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 ARHGEF9O43307 516 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 IDH3BO43837 385 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 LYZL6O75951 148 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 IGFBP5P24593 272 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 ZNF433Q8N7K0 673 aaPredicted RBP25.82■■□□□ 1.72
USP42-202ENST00000404008 OR2T33Q8NG76 320 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 OR4Q3Q8NH05 313 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 KISS1RQ969F8 398 aaPredicted RBP25.82■■□□□ 1.72
USP42-202ENST00000404008 C9orf16Q9BUW7 83 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 ALG12Q9BV10 488 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 HDHD5Q9BXW7 423 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 ULBP2Q9BZM5 246 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 GPR52Q9Y2T5 361 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 C16orf97H3BN30 126 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 XKRYO14609 159 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 EI24O14681 340 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 MITFO75030 526 aaPredicted RBP25.82■■□□□ 1.72
USP42-202ENST00000404008 IGFBP2P18065 325 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 DAG1Q14118 895 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 TSC22D1Q15714 1073 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 C9orf135Q5VTT2 229 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 LRFN4Q6PJG9 635 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 ADCK1Q86TW2 530 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 LNX2Q8N448 690 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 CBR4Q8N4T8 237 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 NMD3Q96D46 503 aaKnown RBP25.82■■□□□ 1.72
USP42-202ENST00000404008 ZNF837Q96EG3 531 aaPredicted RBP25.82■■□□□ 1.72
USP42-202ENST00000404008 USE1Q9NZ43 259 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 BAIAP2Q9UQB8 552 aa25.82■■□□□ 1.72
USP42-202ENST00000404008 DOPEY2Q9Y3R5 2298 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms