RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 HOXC12P31275 282 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 RPS6KA3P51812 740 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 IST1P53990 364 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 RAP1BP61224 184 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 RAP1AP62834 184 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 ERVK-25P63136 954 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 TLE4Q04727 773 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 TOP3AQ13472 1001 aaPredicted RBP12.04□□□□□ -0.48
VPREB1-202ENST00000403807 KPNB1Q14974 876 aaKnown RBP12.04□□□□□ -0.48
VPREB1-202ENST00000403807 ZSCAN26Q16670 478 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 PHYHD1Q5SRE7 291 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 C1QTNF12Q5T7M4 302 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 GPR139Q6DWJ6 353 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 ZNF770Q6IQ21 691 aaPredicted RBP12.04□□□□□ -0.48
VPREB1-202ENST00000403807 RPL13AP3Q6NVV1 102 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 DPY19L2P2Q6ZN68 376 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 C22orf34Q6ZV56 151 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 LINGO2Q7L985 606 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 WDFY1Q8IWB7 410 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 C17orf78Q8N4C9 275 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 AQP11Q8NBQ7 271 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 OR1K1Q8NGR3 316 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 NRBF2Q96F24 287 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 BOD1Q96IK1 185 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 RBP7Q96R05 134 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 BDH2Q9BUT1 245 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 KATNB1Q9BVA0 655 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 DGCR6LQ9BY27 220 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 MRPL13Q9BYD1 178 aaKnown RBP12.04□□□□□ -0.48
VPREB1-202ENST00000403807 OR52D1Q9H346 318 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 PDP1Q9P0J1 537 aaPredicted RBP12.04□□□□□ -0.48
VPREB1-202ENST00000403807 POFUT2Q9Y2G5 429 aa12.04□□□□□ -0.48
VPREB1-202ENST00000403807 ARRDC5A6NEK1 342 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 OR5H1A6NKK0 313 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 A6NNC1 897 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 ZNF99A8MXY4 864 aaPredicted RBP12.03□□□□□ -0.48
VPREB1-202ENST00000403807 THBDP07204 575 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 QDPRP09417 244 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 ZNF26P17031 533 aaPredicted RBP12.03□□□□□ -0.48
VPREB1-202ENST00000403807 PAX7P23759 505 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 SLC6A6P31641 620 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 ARF1P84077 181 aaKnown RBP12.03□□□□□ -0.48
VPREB1-202ENST00000403807 RUNX1T1Q06455 604 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 COX10Q12887 443 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 PPA1Q15181 289 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 TAB1Q15750 504 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 FBXW10Q5XX13 1052 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 ALKBH2Q6NS38 261 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 ZFP1Q6P2D0 407 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 ANKRD16Q6P6B7 361 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 TMEM179BQ7Z7N9 219 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 WFDC8Q8IUA0 241 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 ARIH2OSQ8N7S6 290 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 FANK1Q8TC84 345 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 FNDC8Q8TC99 324 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 MCHR2Q969V1 340 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 GTPBP3Q969Y2 492 aaKnown RBP12.03□□□□□ -0.48
VPREB1-202ENST00000403807 TSPAN32Q96QS1 320 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 GPX7Q96SL4 187 aaPredicted RBP12.03□□□□□ -0.48
VPREB1-202ENST00000403807 FEVQ99581 238 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 ALG12Q9BV10 488 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 NRIP3Q9NQ35 241 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 SLC17A5Q9NRA2 495 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 IL20RAQ9UHF4 553 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 AMDHD2Q9Y303 409 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 IER3IP1Q9Y5U9 82 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 PTPN13Q12923 2485 aa12.03□□□□□ -0.48
VPREB1-202ENST00000403807 ADGRG4Q8IZF6 3080 aa12.02□□□□□ -0.48
VPREB1-202ENST00000403807 XKRYO14609 159 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 IMPA2O14732 288 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 ARHGEF9O43307 516 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 DHHO43323 396 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 WNT11O96014 354 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 APEHP13798 732 aaKnown RBP12.02□□□□□ -0.49
VPREB1-202ENST00000403807 ANXA8P13928 327 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 FXYD6P3P58550 94 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 CD47Q08722 323 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 ATP6AP1Q15904 470 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 HIST3H3Q16695 136 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 THEM4Q5T1C6 240 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 LRFN4Q6PJG9 635 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 KLHL24Q6TFL4 600 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 CD300LDQ6UXZ3 194 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 THSD4Q6ZMP0 1018 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 RASSF6Q6ZTQ3 369 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 CCDC36Q8IYA8 594 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 SYT14Q8NB59 555 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 NOXO1Q8NFA2 376 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 OR52L1Q8NGH7 329 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 OR52N5Q8NH56 324 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 OR5K1Q8NHB7 308 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 ZNF519Q8TB69 540 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 MAGEE2Q8TD90 523 aaPredicted RBP12.02□□□□□ -0.49
VPREB1-202ENST00000403807 PYDC1Q8WXC3 89 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 HDAC2Q92769 488 aaKnown RBP12.02□□□□□ -0.49
VPREB1-202ENST00000403807 BCL2L2Q92843 193 aaPredicted RBP12.02□□□□□ -0.49
VPREB1-202ENST00000403807 ZNF837Q96EG3 531 aaPredicted RBP12.02□□□□□ -0.49
VPREB1-202ENST00000403807 SAMD8Q96LT4 415 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 Q96M85 177 aa12.02□□□□□ -0.49
VPREB1-202ENST00000403807 ZNF570Q96NI8 536 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms