RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 CCSO14618 274 aa12.85□□□□□ -0.35
ATG3-202ENST00000402314 SELENOFO60613 162 aa12.85□□□□□ -0.35
ATG3-202ENST00000402314 MAS1P04201 325 aa12.85□□□□□ -0.35
ATG3-202ENST00000402314 MAP3K8P41279 467 aa12.85□□□□□ -0.35
ATG3-202ENST00000402314 KCNJ3P48549 501 aa12.85□□□□□ -0.35
ATG3-202ENST00000402314 DYRK1AQ13627 763 aa12.85□□□□□ -0.35
ATG3-202ENST00000402314 GUCA2BQ16661 112 aa12.85□□□□□ -0.35
ATG3-202ENST00000402314 DMKNQ6E0U4 476 aaPredicted RBP12.85□□□□□ -0.35
ATG3-202ENST00000402314 LIN54Q6MZP7 749 aa12.85□□□□□ -0.35
ATG3-202ENST00000402314 NPSR1Q6W5P4 371 aa12.85□□□□□ -0.35
ATG3-202ENST00000402314 TMPRSS11FQ6ZWK6 438 aa12.85□□□□□ -0.35
ATG3-202ENST00000402314 PXT1Q8NFP0 134 aa12.85□□□□□ -0.35
ATG3-202ENST00000402314 GFI1Q99684 422 aa12.85□□□□□ -0.35
ATG3-202ENST00000402314 KLHDC3Q9BQ90 382 aa12.85□□□□□ -0.35
ATG3-202ENST00000402314 DNAJB12Q9NXW2 375 aaKnown RBP12.85□□□□□ -0.35
ATG3-202ENST00000402314 SLC35A3Q9Y2D2 325 aa12.85□□□□□ -0.35
ATG3-202ENST00000402314 IER3IP1Q9Y5U9 82 aa12.85□□□□□ -0.35
ATG3-202ENST00000402314 RP1P56715 2156 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 A0A087WV62 115 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 OR2M5A3KFT3 312 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 DISC1C4P0D8 188 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 PIN1P1O15428 100 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 TNFP01375 233 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 SRMP19623 302 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 RPS27P42677 84 aaKnown RBP12.84□□□□□ -0.35
ATG3-202ENST00000402314 LUMP51884 338 aaPredicted RBP12.84□□□□□ -0.35
ATG3-202ENST00000402314 ART1P52961 327 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 NRG3P56975 720 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 UBE2IP63279 158 aaKnown RBP12.84□□□□□ -0.35
ATG3-202ENST00000402314 EXOSC6Q5RKV6 272 aaKnown RBP12.84□□□□□ -0.35
ATG3-202ENST00000402314 CDH26Q8IXH8 852 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 TSNAXQ99598 290 aaKnown RBP12.84□□□□□ -0.35
ATG3-202ENST00000402314 FBXL3Q9UKT7 428 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 NPFFR2Q9Y5X5 522 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 ASCC3Q8N3C0 2202 aaKnown RBP12.84□□□□□ -0.35
ATG3-202ENST00000402314 UBE2QL1A1L167 161 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 C17orf51A8MQB3 221 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 THEGLP0DJG4 465 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 CTSEP14091 401 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 CSRP2Q16527 193 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 MAMSTRQ6ZN01 415 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 OR5M9Q8NGP3 310 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 RBM18Q96H35 190 aaKnown RBP12.84□□□□□ -0.35
ATG3-202ENST00000402314 CDCA3Q99618 268 aaPredicted RBP12.84□□□□□ -0.35
ATG3-202ENST00000402314 IFT22Q9H7X7 185 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 GPN1Q9HCN4 374 aaPredicted RBP12.84□□□□□ -0.35
ATG3-202ENST00000402314 SLC22A11Q9NSA0 550 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 ANKRD10Q9NXR5 420 aa12.84□□□□□ -0.35
ATG3-202ENST00000402314 F5H5P2 479 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 NKX2-2O95096 273 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 HOXC4P09017 264 aaPredicted RBP12.83□□□□□ -0.35
ATG3-202ENST00000402314 ITPKBP27987 946 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 TMEM44Q2T9K0 475 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 UBE2NLQ5JXB2 153 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 ZNF626Q68DY1 528 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 HAGHLQ6PII5 290 aaPredicted RBP12.83□□□□□ -0.35
ATG3-202ENST00000402314 RNF44Q7L0R7 432 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 FAM219AQ8IW50 185 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 OR51S1Q8NGJ8 323 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 CPNE2Q96FN4 548 aaPredicted RBP12.83□□□□□ -0.35
ATG3-202ENST00000402314 NMNAT3Q96T66 252 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 STACQ99469 402 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 MAP3K3Q99759 626 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 UQCC2Q9BRT2 126 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 PELOQ9BRX2 385 aaKnown RBP12.83□□□□□ -0.35
ATG3-202ENST00000402314 PTDSS2Q9BVG9 487 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 ST6GALNAC2Q9UJ37 374 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 FBXO4Q9UKT5 387 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 RNF215Q9Y6U7 377 aa12.83□□□□□ -0.35
ATG3-202ENST00000402314 TMEM200CA6NKL6 621 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 TNFRSF10CO14798 259 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 B3GALNT1O75752 331 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 ZCCHC12Q6PEW1 402 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 RNF113BQ8IZP6 322 aaKnown RBP12.83□□□□□ -0.36
ATG3-202ENST00000402314 OR6V1Q8N148 313 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 GPBAR1Q8TDU6 330 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 FBXO17Q96EF6 278 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 TSSK2Q96PF2 358 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 ZNF471Q9BX82 626 aaPredicted RBP12.83□□□□□ -0.36
ATG3-202ENST00000402314 TAS2R5Q9NYW4 299 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 ABRACLQ9P1F3 81 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 TMEM184BQ9Y519 407 aaPredicted RBP12.83□□□□□ -0.36
ATG3-202ENST00000402314 SLC22A31A6NKX4 558 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 FAM25EA8MYX2 175 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 ZNF3P17036 446 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 RPL4P36578 427 aaKnown RBP12.83□□□□□ -0.36
ATG3-202ENST00000402314 RPS11P62280 158 aaKnown RBP eCLIP12.83□□□□□ -0.36
ATG3-202ENST00000402314 FZD2Q14332 565 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 B3GNTL1Q67FW5 361 aaPredicted RBP12.83□□□□□ -0.36
ATG3-202ENST00000402314 UNQ6126/PRO20091Q6UXV3 157 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 MCATQ8IVS2 390 aaKnown RBP12.83□□□□□ -0.36
ATG3-202ENST00000402314 RASD2Q96D21 266 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 S100A16Q96FQ6 103 aaKnown RBP12.83□□□□□ -0.36
ATG3-202ENST00000402314 TPSD1Q9BZJ3 242 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 ZMAT3Q9HA38 289 aaKnown RBP12.83□□□□□ -0.36
ATG3-202ENST00000402314 ZMAT5Q9UDW3 170 aaKnown RBP12.83□□□□□ -0.36
ATG3-202ENST00000402314 GLS2Q9UI32 602 aa12.83□□□□□ -0.36
ATG3-202ENST00000402314 ABCA7Q8IZY2 2146 aa12.82□□□□□ -0.36
ATG3-202ENST00000402314 PCDH15Q96QU1 1955 aa12.82□□□□□ -0.36
ATG3-202ENST00000402314 TRAV20A0A0B4J274 112 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms