RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 SPACA9Q96E40 222 aaPredicted RBP12.76□□□□□ -0.37
SCAF4-202ENST00000399804 EDEM2Q9BV94 578 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 C1orf198Q9H425 327 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 NRIP3Q9NQ35 241 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 ABRACLQ9P1F3 81 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 KLHL13Q9P2N7 655 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 EMC9Q9Y3B6 208 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 PCDHGA3Q9Y5H0 932 aa12.76□□□□□ -0.37
SCAF4-202ENST00000399804 IGHV5-10-1A0A0J9YXX1 117 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 APOC1P02654 83 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 LCATP04180 440 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 CTBP2P56545 445 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 FOXF1Q12946 379 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 BAIAP2L2Q6UXY1 529 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 YRDCQ86U90 279 aaKnown RBP12.75□□□□□ -0.37
SCAF4-202ENST00000399804 POGLUT1Q8NBL1 392 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 OR10G3Q8NGC4 313 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 ADAMTS14Q8WXS8 1223 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 THOC3Q96J01 351 aaKnown RBP12.75□□□□□ -0.37
SCAF4-202ENST00000399804 CHST2Q9Y4C5 530 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 IGKV1D-16P01601 117 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 SSX1Q16384 188 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 HYAL4Q2M3T9 481 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 FAM27D1Q5T7N8 215 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 TSEN54Q7Z6J9 526 aaKnown RBP12.75□□□□□ -0.37
SCAF4-202ENST00000399804 KCTD12Q96CX2 325 aaKnown RBP12.75□□□□□ -0.37
SCAF4-202ENST00000399804 ZNF501Q96CX3 271 aaPredicted RBP12.75□□□□□ -0.37
SCAF4-202ENST00000399804 MOGAT1Q96PD6 335 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 MNTQ99583 582 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 TMEM43Q9BTV4 400 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 CHST11Q9NPF2 352 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 MEPEQ9NQ76 525 aaPredicted RBP12.75□□□□□ -0.37
SCAF4-202ENST00000399804 FBXO8Q9NRD0 319 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 TCRBV16S1A1N1A0A5B0 115 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 ANKRD61A6NGH8 418 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 TRIM64CA6NLI5 447 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 TMEM212A6NML5 194 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 FZD7O75084 574 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 FAM189A2Q15884 450 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 DTWD2Q8NBA8 298 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 RNASE11Q8TAA1 199 aaKnown RBP12.75□□□□□ -0.37
SCAF4-202ENST00000399804 SYNPRQ8TBG9 265 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 CHMP1AQ9HD42 196 aaPredicted RBP12.75□□□□□ -0.37
SCAF4-202ENST00000399804 ISYNA1Q9NPH2 558 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 MYOTQ9UBF9 498 aa12.75□□□□□ -0.37
SCAF4-202ENST00000399804 MAB21L1Q13394 359 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 TOMM34Q15785 309 aaPredicted RBP12.74□□□□□ -0.37
SCAF4-202ENST00000399804 EMC4Q5J8M3 183 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 DCXRQ7Z4W1 244 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 GRAMD2AQ8IUY3 354 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 LRRC18Q8N456 261 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 PLPP5Q8NEB5 264 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 SLC25A43Q8WUT9 341 aaPredicted RBP12.74□□□□□ -0.37
SCAF4-202ENST00000399804 LRFN5Q96NI6 719 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 SLIRPQ9GZT3 109 aaKnown RBP12.74□□□□□ -0.37
SCAF4-202ENST00000399804 KLHL9Q9P2J3 617 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 ZNF69Q9UC07 566 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 ZNF878C9JN71 531 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 M0R296 226 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 DLSTP36957 453 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 ZXDAP98168 799 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 TRA2AQ13595 282 aaKnown RBP eCLIP12.74□□□□□ -0.371e-13■■■■□ 23.2
SCAF4-202ENST00000399804 DHRS13Q6UX07 377 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 SETD6Q8TBK2 473 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 PIGQQ9BRB3 760 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 TMEM9BQ9NQ34 198 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 VSX1Q9NZR4 365 aaPredicted RBP12.74□□□□□ -0.37
SCAF4-202ENST00000399804 CIB4A0PJX0 185 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 D6RAR5 112 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 STOMP27105 288 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 CSF2RBP32927 897 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 C1QL3Q5VWW1 255 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 ARMC10Q8N2F6 343 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 ZNF454Q8N9F8 522 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 DOCK9Q9BZ29 2069 aa12.74□□□□□ -0.37
SCAF4-202ENST00000399804 PRSS37A4D1T9 235 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 ARPC3O15145 178 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 HRO43593 1189 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 SLC2A5P22732 501 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 POU3F4P49335 361 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 GPR50Q13585 617 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 OXA1LQ15070 435 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 FAM205BPQ63HN1 556 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 LAIR1Q6GTX8 287 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 PLCZ1Q86YW0 608 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 LYSMD2Q8IV50 215 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 RDH10Q8IZV5 341 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 LSMEM1Q8N8F7 131 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 HOXB13Q92826 284 aaPredicted RBP12.73□□□□□ -0.37
SCAF4-202ENST00000399804 CDC6Q99741 560 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 TXNIPQ9H3M7 391 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 MOV10Q9HCE1 1003 aaKnown RBP12.73□□□□□ -0.37
SCAF4-202ENST00000399804 OR6C68A6NDL8 312 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 EIF1BO60739 113 aaKnown RBP12.73□□□□□ -0.37
SCAF4-202ENST00000399804 CARD18P57730 90 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 SF3B4Q15427 424 aaKnown RBP eCLIP12.73□□□□□ -0.377e-7■■□□□ 12.3
SCAF4-202ENST00000399804 C9orf135Q5VTT2 229 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 CORO6Q6QEF8 472 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 COMTD1Q86VU5 262 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 LGALS14Q8TCE9 139 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms