RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 ERVH48-1M5A8F1 160 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 ACOT7O00154 380 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 SSNA1O43805 119 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 ADRA2CP18825 462 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 CXCL3P19876 107 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 NR0B1P51843 470 aaKnown RBP20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 BLVRAP53004 296 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 GPLD1P80108 840 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 PLCXD2Q0VAA5 305 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 DPY19L4Q7Z388 723 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 C9orf40Q8IXQ3 194 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 BMPERQ8N8U9 685 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 ASB17Q8WXJ9 295 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 RTN4RQ9BZR6 473 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 COPS7AQ9UBW8 275 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 MTCH2Q9Y6C9 303 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 ANKRD20A5PA0PJZ0 165 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 ANXA2P2A6NMY6 339 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 ANXA2P07355 339 aaKnown RBP20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 PNLIPRP2P54317 469 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 SGCBQ16585 318 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 ZNF227Q86WZ6 799 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 SERPINA12Q8IW75 414 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 OTOSQ8NHW6 89 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 DCBLD2Q96PD2 775 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 WWTR1Q9GZV5 400 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 ZNF304Q9HCX3 659 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 DIABLOQ9NR28 239 aa20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 COL5A1P20908 1838 aaPredicted RBP20.9■□□□□ 0.94
RABGGTA-202ENST00000399409 A0A087WV48 116 aa20.89■□□□□ 0.94
RABGGTA-202ENST00000399409 OR6C76A6NM76 312 aa20.89■□□□□ 0.94
RABGGTA-202ENST00000399409 P2RX1P51575 399 aa20.89■□□□□ 0.94
RABGGTA-202ENST00000399409 NXPH1P58417 271 aa20.89■□□□□ 0.94
RABGGTA-202ENST00000399409 ZP2Q05996 745 aa20.89■□□□□ 0.94
RABGGTA-202ENST00000399409 CBFBQ13951 182 aa20.89■□□□□ 0.94
RABGGTA-202ENST00000399409 SFRP4Q6FHJ7 346 aaPredicted RBP20.89■□□□□ 0.94
RABGGTA-202ENST00000399409 SLC29A4Q7RTT9 530 aa20.89■□□□□ 0.94
RABGGTA-202ENST00000399409 PM20D2Q8IYS1 436 aa20.89■□□□□ 0.94
RABGGTA-202ENST00000399409 OR11G2Q8NGC1 345 aa20.89■□□□□ 0.94
RABGGTA-202ENST00000399409 METTL21AQ8WXB1 218 aa20.89■□□□□ 0.94
RABGGTA-202ENST00000399409 ZNF576Q9H609 170 aa20.89■□□□□ 0.94
RABGGTA-202ENST00000399409 DHCR7Q9UBM7 475 aaKnown RBP20.89■□□□□ 0.94
RABGGTA-202ENST00000399409 SCP2D1Q9UJQ7 156 aa20.89■□□□□ 0.94
RABGGTA-202ENST00000399409 GMDSO60547 372 aa20.89■□□□□ 0.93
RABGGTA-202ENST00000399409 CDK2P24941 298 aa20.89■□□□□ 0.93
RABGGTA-202ENST00000399409 POLR2HP52434 150 aaKnown RBP20.89■□□□□ 0.93
RABGGTA-202ENST00000399409 C19orf57Q0VDD7 668 aa20.89■□□□□ 0.93
RABGGTA-202ENST00000399409 TOMM34Q15785 309 aaPredicted RBP20.89■□□□□ 0.93
RABGGTA-202ENST00000399409 METTL11BQ5VVY1 283 aa20.89■□□□□ 0.93
RABGGTA-202ENST00000399409 TMPRSS12Q86WS5 348 aa20.89■□□□□ 0.93
RABGGTA-202ENST00000399409 OR1L3Q8NH93 324 aa20.89■□□□□ 0.93
RABGGTA-202ENST00000399409 OMA1Q96E52 524 aa20.89■□□□□ 0.93
RABGGTA-202ENST00000399409 ELF4Q99607 663 aaPredicted RBP20.89■□□□□ 0.93
RABGGTA-202ENST00000399409 NRSN2Q9GZP1 204 aa20.89■□□□□ 0.93
RABGGTA-202ENST00000399409 TAS2R10Q9NYW0 307 aa20.89■□□□□ 0.93
RABGGTA-202ENST00000399409 MRPL15Q9P015 296 aaKnown RBP20.89■□□□□ 0.93
RABGGTA-202ENST00000399409 SLC23A1Q9UHI7 598 aa20.89■□□□□ 0.93
RABGGTA-202ENST00000399409 FBXL3Q9UKT7 428 aa20.89■□□□□ 0.93
RABGGTA-202ENST00000399409 NPTNQ9Y639 398 aa20.89■□□□□ 0.93
RABGGTA-202ENST00000399409 A0A1B0GUH1 482 aa20.88■□□□□ 0.93
RABGGTA-202ENST00000399409 NUDT14O95848 222 aa20.88■□□□□ 0.93
RABGGTA-202ENST00000399409 CFPP27918 469 aa20.88■□□□□ 0.93
RABGGTA-202ENST00000399409 TAS2R20P59543 309 aa20.88■□□□□ 0.93
RABGGTA-202ENST00000399409 RPL27P61353 136 aaKnown RBP20.88■□□□□ 0.93
RABGGTA-202ENST00000399409 NSDHLQ15738 373 aa20.88■□□□□ 0.93
RABGGTA-202ENST00000399409 PLXDC1Q8IUK5 500 aa20.88■□□□□ 0.93
RABGGTA-202ENST00000399409 C4orf45Q96LM5 186 aa20.88■□□□□ 0.93
RABGGTA-202ENST00000399409 STEAP1Q9UHE8 339 aa20.88■□□□□ 0.93
RABGGTA-202ENST00000399409 DMWDQ09019 674 aa20.88■□□□□ 0.93
RABGGTA-202ENST00000399409 D2HGDHQ8N465 521 aa20.88■□□□□ 0.93
RABGGTA-202ENST00000399409 OR1N1Q8NGS0 311 aa20.88■□□□□ 0.93
RABGGTA-202ENST00000399409 OR8B4Q96RC9 309 aa20.88■□□□□ 0.93
RABGGTA-202ENST00000399409 NKIRAS2Q9NYR9 191 aa20.88■□□□□ 0.93
RABGGTA-202ENST00000399409 B9D1Q9UPM9 204 aa20.88■□□□□ 0.93
RABGGTA-202ENST00000399409 IGHV1OR21-1A0A087WYE8 117 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 TPOP07202 933 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 OR1D5P58170 312 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 YOD1Q5VVQ6 348 aaPredicted RBP20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 DNM1P46Q6ZS02 220 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 PRSS35Q8N3Z0 413 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 BEST4Q8NFU0 473 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 PTDSS2Q9BVG9 487 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 DLL4Q9NR61 685 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 B3GNT2Q9NY97 397 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 RANBP2P49792 3224 aaKnown RBP20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 UNC80Q8N2C7 3258 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 TMED7-TICAM2A0A0A6YYA0 188 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 PRSS37A4D1T9 235 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 CDC14CA4D256 554 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 GLSO94925 669 aaPredicted RBP20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 PER3P56645 1201 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 CAMK2DQ13557 499 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 POMZP3Q6PJE2 187 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 KNL1Q8NG31 2342 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 OR8H1Q8NGG4 311 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 ZNF519Q8TB69 540 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 TTC9Q92623 222 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 GCDHQ92947 438 aaPredicted RBP20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 MCHR2Q969V1 340 aa20.87■□□□□ 0.93
RABGGTA-202ENST00000399409 TMEM106AQ96A25 262 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms