RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 CPEB1Q9BZB8 566 aaKnown RBP14.89□□□□□ -0.03
ITSN1-209ENST00000399352 ZNF230Q9UIE0 474 aaPredicted RBP14.89□□□□□ -0.03
ITSN1-209ENST00000399352 CHST2Q9Y4C5 530 aa14.89□□□□□ -0.03
ITSN1-209ENST00000399352 NPFFR2Q9Y5X5 522 aa14.89□□□□□ -0.03
ITSN1-209ENST00000399352 BAZ2AQ9UIF9 1905 aaKnown RBP14.89□□□□□ -0.03
ITSN1-209ENST00000399352 SETD1AO15047 1707 aaKnown RBP14.89□□□□□ -0.03
ITSN1-209ENST00000399352 H2AFB1P0C5Y9 115 aa14.89□□□□□ -0.03
ITSN1-209ENST00000399352 TRIM61Q5EBN2 209 aa14.89□□□□□ -0.03
ITSN1-209ENST00000399352 IL34Q6ZMJ4 242 aa14.89□□□□□ -0.03
ITSN1-209ENST00000399352 ZNF680Q8NEM1 530 aa14.89□□□□□ -0.03
ITSN1-209ENST00000399352 RASD2Q96D21 266 aa14.89□□□□□ -0.03
ITSN1-209ENST00000399352 MCTS1Q9ULC4 181 aaKnown RBP14.89□□□□□ -0.03
ITSN1-209ENST00000399352 OR6C68A6NDL8 312 aa14.89□□□□□ -0.03
ITSN1-209ENST00000399352 GABRB1P18505 474 aa14.89□□□□□ -0.03
ITSN1-209ENST00000399352 EPHA4P54764 986 aa14.89□□□□□ -0.03
ITSN1-209ENST00000399352 ANKRD34AQ69YU3 496 aa14.89□□□□□ -0.03
ITSN1-209ENST00000399352 FAAP20Q6NZ36 180 aa14.89□□□□□ -0.03
ITSN1-209ENST00000399352 SMIM15Q7Z3B0 74 aa14.89□□□□□ -0.03
ITSN1-209ENST00000399352 RBM45Q8IUH3 476 aaKnown RBP14.89□□□□□ -0.03
ITSN1-209ENST00000399352 FAM185AQ8N0U4 392 aa14.89□□□□□ -0.03
ITSN1-209ENST00000399352 ZNF566Q969W8 418 aa14.89□□□□□ -0.03
ITSN1-209ENST00000399352 GNG12Q9UBI6 72 aa14.89□□□□□ -0.03
ITSN1-209ENST00000399352 C1SP09871 688 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 GLI4P10075 376 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 FPR3P25089 353 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 MAT1AQ00266 395 aaKnown RBP14.88□□□□□ -0.03
ITSN1-209ENST00000399352 CLEC9AQ6UXN8 241 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 DBX2Q6ZNG2 339 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 LINC00299Q6ZSB3 139 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 LANCL3Q6ZV70 420 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 GLCCI1Q86VQ1 547 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 CDCP1Q9H5V8 836 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 V9GYS6 101 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 TRBV11-1A0A0K0K1C0 115 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 ZNF816-ZNF321PA0A0X1KG74 233 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 ZC3H12DA2A288 527 aaKnown RBP14.88□□□□□ -0.03
ITSN1-209ENST00000399352 TMEM200CA6NKL6 621 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 NME1P15531 152 aaKnown RBP14.88□□□□□ -0.03
ITSN1-209ENST00000399352 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
ITSN1-209ENST00000399352 SNRPGP62308 76 aaKnown RBP14.88□□□□□ -0.03
ITSN1-209ENST00000399352 TMEM176BQ3YBM2 270 aaPredicted RBP14.88□□□□□ -0.03
ITSN1-209ENST00000399352 SYT14P1Q58G82 188 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 TMEM123Q8N131 208 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 ZNF321PQ8N8H1 164 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 OR6M1Q8NGM8 313 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 CRYGNQ8WXF5 182 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 PIGTQ969N2 578 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 TVP23CQ96ET8 276 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 ABHD6Q9BV23 337 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 CHST8Q9H2A9 424 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 FLVCR2Q9UPI3 526 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 PLSCR5A0PG75 271 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 GABARAPH6UMI1 98 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 H7BYZ3 331 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 FZD9O00144 591 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 GDF1P27539 372 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 CD300LGQ6UXG3 332 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 OR5L1Q8NGL2 311 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 OR4A16Q8NH70 328 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 PTBP1P26599 531 aaKnown RBP eCLIP14.88□□□□□ -0.035e-10■■■■■ 30.4
ITSN1-209ENST00000399352 CLDN17P56750 224 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 GLIPR1L1Q6UWM5 242 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 FAM103A1Q9BTL3 118 aaKnown RBP14.88□□□□□ -0.03
ITSN1-209ENST00000399352 MED9Q9NWA0 146 aa14.88□□□□□ -0.03
ITSN1-209ENST00000399352 IGFBP1P08833 259 aaPredicted RBP14.87□□□□□ -0.03
ITSN1-209ENST00000399352 PCBD1P61457 104 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 MFAP5Q13361 173 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 ZNF750Q32MQ0 723 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 FAM74A1Q5RGS3 127 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 RBMXL3Q8N7X1 1067 aaKnown RBP14.87□□□□□ -0.03
ITSN1-209ENST00000399352 LFNGQ8NES3 379 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 DYNC2LI1Q8TCX1 351 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 RAB22AQ9UL26 194 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 PIAS3Q9Y6X2 628 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 ANGPTL7O43827 346 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 ADAMTS4O75173 837 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 NTF3P20783 257 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 ARHGAP11BQ3KRB8 267 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 CLLU1OSQ5K130 101 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 LPCAT3Q6P1A2 487 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 LGI3Q8N145 548 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 C1QTNF3Q9BXJ4 246 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 KLF16Q9BXK1 252 aaPredicted RBP14.87□□□□□ -0.03
ITSN1-209ENST00000399352 EVA1AQ9H8M9 152 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 HCFC1R1Q9NWW0 138 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 HSD17B6O14756 317 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 TRAF3IP2O43734 574 aaPredicted RBP14.87□□□□□ -0.03
ITSN1-209ENST00000399352 HBQ1P09105 142 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 PRSS16Q9NQE7 514 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 CBY1Q9Y3M2 126 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 RAB27BO00194 218 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 PLAC9Q5JTB6 97 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 SLCO4C1Q6ZQN7 724 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 RFLNAQ6ZTI6 216 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 EID2Q8N6I1 236 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 NEURL3Q96EH8 262 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 MAP6Q96JE9 813 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 GLIPR2Q9H4G4 154 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 SERINC4A6NH21 518 aa14.87□□□□□ -0.03
ITSN1-209ENST00000399352 PRAMEF4O60810 478 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms