RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 RARRES3Q9UL19 164 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 CLEC4AQ9UMR7 237 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 KLHDC2Q9Y2U9 406 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 CACNG2Q9Y698 323 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 TMEM72A0PK05 275 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 HMX3A6NHT5 357 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 SUSD5O60279 629 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 FADS1O60427 444 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 GLCEO94923 617 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 RPP14O95059 124 aaKnown RBP10.65□□□□□ -0.7
COL25A1-202ENST00000399127 PGCP20142 388 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 MYL9P24844 172 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 EVX1P49640 407 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 GBX2P52951 348 aaPredicted RBP10.65□□□□□ -0.7
COL25A1-202ENST00000399127 ACTA2P62736 377 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 ACTG2P63267 376 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 S100A12P80511 92 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 CDK5R1Q15078 307 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.65□□□□□ -0.7
COL25A1-202ENST00000399127 ZNF517Q6ZMY9 492 aaPredicted RBP10.65□□□□□ -0.7
COL25A1-202ENST00000399127 RABEPKQ7Z6M1 372 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.65□□□□□ -0.7
COL25A1-202ENST00000399127 SAMD12Q8N8I0 201 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 OR8K3Q8NH51 312 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 HSD17B8Q92506 261 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 ATOH1Q92858 354 aaPredicted RBP10.65□□□□□ -0.7
COL25A1-202ENST00000399127 SMIM19Q96E16 107 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 SEC22CQ9BRL7 303 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 BEX2Q9BXY8 128 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 C11orf54Q9H0W9 315 aaPredicted RBP10.65□□□□□ -0.7
COL25A1-202ENST00000399127 RXFP3Q9NSD7 469 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 OCIAD1Q9NX40 245 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 ING1Q9UK53 422 aaPredicted RBP10.65□□□□□ -0.7
COL25A1-202ENST00000399127 NPFFR2Q9Y5X5 522 aa10.65□□□□□ -0.7
COL25A1-202ENST00000399127 TOX3O15405 576 aaPredicted RBP10.64□□□□□ -0.71
COL25A1-202ENST00000399127 SC5DO75845 299 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 SYPP08247 313 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 GALP22466 123 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 CBFBQ13951 182 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 EFR3AQ14156 821 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 COL28A1Q2UY09 1125 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 HBMQ6B0K9 141 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 SFXN4Q6P4A7 337 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 MZT2AQ6P582 158 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 PM20D2Q8IYS1 436 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 OR6V1Q8N148 313 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 PIAS4Q8N2W9 510 aaPredicted RBP10.64□□□□□ -0.71
COL25A1-202ENST00000399127 GDPD1Q8N9F7 314 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 OR4D9Q8NGE8 314 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 LIPHQ8WWY8 451 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 CCNL2Q96S94 520 aaPredicted RBP10.64□□□□□ -0.71
COL25A1-202ENST00000399127 TGIF2Q9GZN2 237 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 PPP1R3EQ9H7J1 279 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 TAS2R5Q9NYW4 299 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 PCDHGB7Q9Y5F8 929 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 TNRC6BQ9UPQ9 1833 aaKnown RBP10.64□□□□□ -0.71
COL25A1-202ENST00000399127 TMED7-TICAM2A0A0A6YYA0 188 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 TRBV11-1A0A0K0K1C0 115 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 A0A1W2PQD3 144 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 B4DXG7 233 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 H3BSH0 61 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 EIF4E2O60573 245 aaKnown RBP10.64□□□□□ -0.71
COL25A1-202ENST00000399127 ALOX12BO75342 701 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 BGLAPP02818 100 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 HOXD4P09016 255 aaPredicted RBP10.64□□□□□ -0.71
COL25A1-202ENST00000399127 OR8G3PP0DMU2 310 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 GAAP10253 952 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 NANOS3P60323 173 aaKnown RBP10.64□□□□□ -0.71
COL25A1-202ENST00000399127 SNRPD2P62316 118 aaKnown RBP10.64□□□□□ -0.71
COL25A1-202ENST00000399127 DCDP81605 110 aaKnown RBP10.64□□□□□ -0.71
COL25A1-202ENST00000399127 FAPQ12884 760 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 SLC35D3Q5M8T2 416 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 PEAR1Q5VY43 1037 aaPredicted RBP10.64□□□□□ -0.71
COL25A1-202ENST00000399127 SLC23A3Q6PIS1 610 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 PAPD4Q6PIY7 484 aaKnown RBP10.64□□□□□ -0.71
COL25A1-202ENST00000399127 PXKQ7Z7A4 578 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 KDM8Q8N371 416 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 IFI44Q8TCB0 444 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 GPR119Q8TDV5 335 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 METTL21AQ8WXB1 218 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 SLC7A6Q92536 515 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 EXTL2Q9UBQ6 330 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 CYB5R1Q9UHQ9 305 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 TMED7Q9Y3B3 224 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 NCOR1O75376 2440 aa10.64□□□□□ -0.71
COL25A1-202ENST00000399127 TRAV36DV7A0A075B6V5 113 aa10.63□□□□□ -0.71
COL25A1-202ENST00000399127 OR6C76A6NM76 312 aa10.63□□□□□ -0.71
COL25A1-202ENST00000399127 AKR7A2O43488 359 aa10.63□□□□□ -0.71
COL25A1-202ENST00000399127 SULT1B1O43704 296 aa10.63□□□□□ -0.71
COL25A1-202ENST00000399127 EIF4EP06730 217 aaKnown RBP10.63□□□□□ -0.71
COL25A1-202ENST00000399127 TRAPPC2P0DI81 140 aa10.63□□□□□ -0.71
COL25A1-202ENST00000399127 TRAPPC2BP0DI82 140 aa10.63□□□□□ -0.71
COL25A1-202ENST00000399127 ERP29P30040 261 aaKnown RBP10.63□□□□□ -0.71
COL25A1-202ENST00000399127 THBS2P35442 1172 aa10.63□□□□□ -0.71
COL25A1-202ENST00000399127 MPLP40238 635 aa10.63□□□□□ -0.71
COL25A1-202ENST00000399127 P2RX1P51575 399 aa10.63□□□□□ -0.71
COL25A1-202ENST00000399127 RPS11P62280 158 aaKnown RBP eCLIP10.63□□□□□ -0.71
COL25A1-202ENST00000399127 ISXQ2M1V0 245 aa10.63□□□□□ -0.71
COL25A1-202ENST00000399127 FAM199XQ6PEV8 388 aaPredicted RBP10.63□□□□□ -0.71
COL25A1-202ENST00000399127 ADGRG3Q86Y34 549 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms