RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 IGHV2OR16-5A0A0B4J2B6 119 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 ELOVL7A1L3X0 281 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 BLOC1S5-TXNDC5H3BN57 136 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 TLX2O43763 284 aaPredicted RBP11.62□□□□□ -0.55
VCX3A-202ENST00000398729 CCDC22O60826 627 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 SHOX2O60902 331 aaPredicted RBP11.62□□□□□ -0.55
VCX3A-202ENST00000398729 ENTPD5O75356 428 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 F12P00748 615 aaPredicted RBP11.62□□□□□ -0.55
VCX3A-202ENST00000398729 HLA-HP01893 362 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 MT-ND1P03886 318 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 THRBP10828 461 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 B4GALT1P15291 398 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 SLC25A16P16260 332 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 KDELR2P33947 212 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 OR1E2P47887 323 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 HGFACQ04756 655 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 EFNB3Q15768 340 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 ADIPOQQ15848 244 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 CYBRD1Q53TN4 286 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 PODNL1Q6PEZ8 512 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 ARPINQ7Z6K5 226 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 MICU2Q8IYU8 434 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 POU5F2Q8N7G0 328 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 TMEM54Q969K7 222 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 ZNF566Q969W8 418 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 RCN3Q96D15 328 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 SLC25A44Q96H78 314 aaPredicted RBP11.62□□□□□ -0.55
VCX3A-202ENST00000398729 VRK1Q99986 396 aaPredicted RBP11.62□□□□□ -0.55
VCX3A-202ENST00000398729 GLTPQ9NZD2 209 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 ARFGEF3Q5TH69 2177 aa11.62□□□□□ -0.55
VCX3A-202ENST00000398729 CD5LO43866 347 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 UBL3O95164 117 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 BCL10O95999 233 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 IGF2P01344 180 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 FUT1P19526 365 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 NPR2P20594 1047 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 IFNA8P32881 189 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 THBS4P35443 961 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 PTDSS1P48651 473 aaKnown RBP11.61□□□□□ -0.55
VCX3A-202ENST00000398729 UGT2B15P54855 530 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 PIGFQ07326 219 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 LOXL1Q08397 574 aaPredicted RBP11.61□□□□□ -0.55
VCX3A-202ENST00000398729 PIN1Q13526 163 aaPredicted RBP11.61□□□□□ -0.55
VCX3A-202ENST00000398729 DAG1Q14118 895 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 MELKQ14680 651 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 PIWIL3Q7Z3Z3 882 aaKnown RBP11.61□□□□□ -0.55
VCX3A-202ENST00000398729 NKAIN4Q8IVV8 208 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 C10orf105Q8TEF2 133 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 TMEM255BQ8WV15 326 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 TMEM239Q8WW34 195 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 TMEM158Q8WZ71 300 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 LZICQ8WZA0 190 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 SGTBQ96EQ0 304 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 TPD52L3Q96J77 140 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 SORCS2Q96PQ0 1159 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 PLK3Q9H4B4 646 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 DENND2DQ9H6A0 471 aaPredicted RBP11.61□□□□□ -0.55
VCX3A-202ENST00000398729 NOX3Q9HBY0 568 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 FBXL3Q9UKT7 428 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 MED31Q9Y3C7 131 aa11.61□□□□□ -0.55
VCX3A-202ENST00000398729 A0A096LNT2 108 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 A0A1W2PRG6 482 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 OR7A10O76100 309 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 LY6HO94772 140 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 RAB36O95755 333 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 IGHG1P01857 330 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 PGA4P0DJD7 388 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 PGA3P0DJD8 388 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 OR8G3PP0DMU2 310 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 COX4I1P13073 169 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 ZNF14P17017 642 aaPredicted RBP11.6□□□□□ -0.55
VCX3A-202ENST00000398729 PPOXP50336 477 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 PDLIM4P50479 330 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 CLRN1P58418 232 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 RAB1AP62820 205 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 SELENOWP63302 87 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 RPL18Q07020 188 aaKnown RBP11.6□□□□□ -0.55
VCX3A-202ENST00000398729 ST3GAL3Q11203 375 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 SNTB2Q13425 540 aaKnown RBP11.6□□□□□ -0.55
VCX3A-202ENST00000398729 KRT80Q6KB66 452 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 HDDC2Q7Z4H3 204 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 SPATA21Q7Z572 469 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 PFN4Q8NHR9 129 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 MS4A3Q96HJ5 214 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 TNFRSF13CQ96RJ3 184 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 RAB1BQ9H0U4 201 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 MYOZ1Q9NP98 299 aaPredicted RBP11.6□□□□□ -0.55
VCX3A-202ENST00000398729 YAE1D1Q9NRH1 226 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 C20orf141Q9NUB4 165 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 TMEM38BQ9NVV0 291 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 CMTM6Q9NX76 183 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 ZNF224Q9NZL3 707 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 SPEF1Q9Y4P9 236 aa11.6□□□□□ -0.55
VCX3A-202ENST00000398729 MCIDASD6RGH6 385 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 hCG_2039718K7EN88 272 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 NDUFS8O00217 210 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 DHHO43323 396 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 GPRIN2O60269 458 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 FARS2O95363 451 aaKnown RBP11.59□□□□□ -0.55
VCX3A-202ENST00000398729 IFNA2P01563 188 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms