RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 HTR2CP28335 458 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 SRSF5Q13243 272 aaKnown RBP10.44□□□□□ -0.74
TTC28-201ENST00000397906 FAM199XQ6PEV8 388 aaPredicted RBP10.44□□□□□ -0.74
TTC28-201ENST00000397906 RBMS3Q6XE24 437 aaKnown RBP10.44□□□□□ -0.74
TTC28-201ENST00000397906 OR10X1Q8NGY0 326 aa10.44□□□□□ -0.74
TTC28-201ENST00000397906 GMPR2Q9P2T1 348 aaKnown RBP10.44□□□□□ -0.74
TTC28-201ENST00000397906 FER1L6Q2WGJ9 1857 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 TSPAN11A1L157 253 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 SPINT2O43291 252 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 FGF17O60258 216 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 KCNK2O95069 426 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 FOXK2Q01167 660 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 SLC15A4Q8N697 577 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 OR2T35Q8NGX2 323 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 ZBTB8AQ96BR9 441 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 MALSU1Q96EH3 234 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 DAZAP1Q96EP5 407 aaKnown RBP10.43□□□□□ -0.74
TTC28-201ENST00000397906 LIN7BQ9HAP6 207 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 H3BMQ9 156 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 M0R082 166 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 ELAVL4P26378 380 aaKnown RBP10.43□□□□□ -0.74
TTC28-201ENST00000397906 AGBL4Q5VU57 503 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 APOOLQ6UXV4 268 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 SPARTQ8N0X7 666 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 OR52N5Q8NH56 324 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 BRIX1Q8TDN6 353 aaKnown RBP10.43□□□□□ -0.74
TTC28-201ENST00000397906 TECTBQ96PL2 329 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 C20orf27Q9GZN8 174 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 AQP7O14520 342 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 ADAM23O75077 832 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 METTL11BQ5VVY1 283 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 MYEOVQ96EZ4 313 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 ANKRD60Q9BZ19 345 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 LYRM4Q9HD34 91 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 DAPP1Q9UN19 280 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 IL9P15248 144 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 GABRG2P18507 467 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 CRMP1Q14194 572 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 CHTF18Q8WVB6 975 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 ZNF582Q96NG8 517 aaPredicted RBP10.43□□□□□ -0.74
TTC28-201ENST00000397906 CHST8Q9H2A9 424 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 SLC5A6Q9Y289 635 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 TNFRSF10AO00220 468 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 ALDH3B1P43353 468 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 CLDN15P56746 228 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 GDPD1Q8N9F7 314 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 HAS2Q92819 552 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 GGHQ92820 318 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 NEURL3Q96EH8 262 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 UBL7Q96S82 380 aaPredicted RBP10.43□□□□□ -0.74
TTC28-201ENST00000397906 PPT2Q9UMR5 302 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 NHSL1Q5SYE7 1610 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 DSCR3O14972 297 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 SULT1B1O43704 296 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 GK3PQ14409 553 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 MOKQ9UQ07 419 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 TMEM221A6NGB7 291 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 PMP2P02689 132 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 GUSBP08236 651 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 RIPPLY1Q0D2K3 151 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 SYT9Q86SS6 491 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 OR6T1Q8NGN1 323 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 BAHD1Q8TBE0 780 aaPredicted RBP10.43□□□□□ -0.74
TTC28-201ENST00000397906 CPPED1Q9BRF8 314 aaPredicted RBP10.43□□□□□ -0.74
TTC28-201ENST00000397906 ITGAMP11215 1152 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 PRKAR1BP31321 381 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 DAPP51397 102 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 HSF1Q00613 529 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 FAM198BQ6UWH4 519 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 CCDC71Q8IV32 467 aaPredicted RBP10.43□□□□□ -0.74
TTC28-201ENST00000397906 GPR173Q9NS66 373 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 SEMA4GQ9NTN9 838 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 FAM96BQ9Y3D0 163 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 MNX1P50219 401 aaPredicted RBP10.43□□□□□ -0.74
TTC28-201ENST00000397906 FRMPD2BQ6IN97 320 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 GUSBP11Q6P575 273 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 L3MBTL4Q8NA19 623 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 SUMF1Q8NBK3 374 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 GJC3Q8NFK1 279 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 ELMOD3Q96FG2 381 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 CLEC1BQ9P126 229 aa10.43□□□□□ -0.74
TTC28-201ENST00000397906 ZC3H12DA2A288 527 aaKnown RBP10.42□□□□□ -0.74
TTC28-201ENST00000397906 FAM90A27PA6NNH2 459 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 SLC7A13Q8TCU3 470 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 OR14A2Q96R54 314 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 CDX2Q99626 313 aaPredicted RBP10.42□□□□□ -0.74
TTC28-201ENST00000397906 A8MXE2 369 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 CLDN1O95832 211 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 QDPRP09417 244 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 APOBEC1P41238 236 aaKnown RBP10.42□□□□□ -0.74
TTC28-201ENST00000397906 ALDH3B2P48448 385 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 GK2Q14410 553 aaPredicted RBP10.42□□□□□ -0.74
TTC28-201ENST00000397906 TMEM217Q8N7C4 229 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 RPP25Q9BUL9 199 aaKnown RBP10.42□□□□□ -0.74
TTC28-201ENST00000397906 HRO43593 1189 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 SLC19A1P41440 591 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 GRINAQ7Z429 371 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 DNAJC22Q8N4W6 341 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 UPRTQ96BW1 309 aa10.42□□□□□ -0.74
TTC28-201ENST00000397906 BARHL1Q9BZE3 327 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms