RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ZIC4Q8N9L1 334 aa24.49■■□□□ 1.51
CPNE1-203ENST00000397442 OR51L1Q8NGJ5 315 aa24.49■■□□□ 1.51
CPNE1-203ENST00000397442 MRPL13Q9BYD1 178 aaKnown RBP24.49■■□□□ 1.51
CPNE1-203ENST00000397442 PRORYQ9H606 182 aa24.49■■□□□ 1.51
CPNE1-203ENST00000397442 DSPP15924 2871 aaKnown RBP24.48■■□□□ 1.51
CPNE1-203ENST00000397442 CYTIPO60759 359 aa24.48■■□□□ 1.51
CPNE1-203ENST00000397442 TRMUO75648 421 aaKnown RBP24.48■■□□□ 1.51
CPNE1-203ENST00000397442 RPS7P62081 194 aaKnown RBP24.48■■□□□ 1.51
CPNE1-203ENST00000397442 KLHL22Q53GT1 634 aa24.48■■□□□ 1.51
CPNE1-203ENST00000397442 LINC01590Q5TEZ4 76 aa24.48■■□□□ 1.51
CPNE1-203ENST00000397442 EEF1A1P5Q5VTE0 462 aa24.48■■□□□ 1.51
CPNE1-203ENST00000397442 FCRLAQ7L513 359 aa24.48■■□□□ 1.51
CPNE1-203ENST00000397442 STX19Q8N4C7 294 aa24.48■■□□□ 1.51
CPNE1-203ENST00000397442 OR6X1Q8NH79 312 aa24.48■■□□□ 1.51
CPNE1-203ENST00000397442 ZNF385AQ96PM9 386 aaKnown RBP24.48■■□□□ 1.51
CPNE1-203ENST00000397442 NUAK2Q9H093 628 aa24.48■■□□□ 1.51
CPNE1-203ENST00000397442 PAQR5Q9NXK6 330 aaPredicted RBP24.48■■□□□ 1.51
CPNE1-203ENST00000397442 HAO2Q9NYQ3 351 aa24.48■■□□□ 1.51
CPNE1-203ENST00000397442 EXOGQ9Y2C4 368 aaKnown RBP24.48■■□□□ 1.51
CPNE1-203ENST00000397442 PCDHGB1Q9Y5G3 927 aa24.48■■□□□ 1.51
CPNE1-203ENST00000397442 SLC35F4A4IF30 521 aa24.47■■□□□ 1.51
CPNE1-203ENST00000397442 PCMT1P22061 227 aa24.47■■□□□ 1.51
CPNE1-203ENST00000397442 SLC16A1P53985 500 aa24.47■■□□□ 1.51
CPNE1-203ENST00000397442 XAF1Q6GPH4 301 aa24.47■■□□□ 1.51
CPNE1-203ENST00000397442 PLXDC2Q6UX71 529 aa24.47■■□□□ 1.51
CPNE1-203ENST00000397442 KCTD8Q6ZWB6 473 aa24.47■■□□□ 1.51
CPNE1-203ENST00000397442 SHFQ7M4L6 423 aa24.47■■□□□ 1.51
CPNE1-203ENST00000397442 ARHGAP9Q9BRR9 750 aa24.47■■□□□ 1.51
CPNE1-203ENST00000397442 PRDM14Q9GZV8 571 aa24.47■■□□□ 1.51
CPNE1-203ENST00000397442 SRA1Q9HD15 236 aaKnown RBP24.47■■□□□ 1.51
CPNE1-203ENST00000397442 FGF20Q9NP95 211 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-203ENST00000397442 ING1Q9UK53 422 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-203ENST00000397442 COMMD3-BMI1R4GMX3 469 aa24.47■■□□□ 1.51
CPNE1-203ENST00000397442 BSNQ9UPA5 3926 aa24.47■■□□□ 1.51
CPNE1-203ENST00000397442 PYCR1P32322 319 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 CLDN17P56750 224 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 EMX1Q04741 257 aaPredicted RBP24.46■■□□□ 1.51
CPNE1-203ENST00000397442 IRF3Q14653 427 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 SLC35D3Q5M8T2 416 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 SYT14Q8NB59 555 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 OR4F15Q8NGB8 312 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 TMEM80Q96HE8 168 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 CDCA4Q9BXL8 241 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 DIMT1Q9UNQ2 313 aaKnown RBP24.46■■□□□ 1.51
CPNE1-203ENST00000397442 SNX5Q9Y5X3 404 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 NPIPA2E9PIF3 369 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 NPIPA3F8WFD2 350 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 J3QRE1 110 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 CRYABP02511 175 aaKnown RBP24.46■■□□□ 1.51
CPNE1-203ENST00000397442 PGA4P0DJD7 388 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 PGA3P0DJD8 388 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 PON3Q15166 354 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 ZBTB46Q86UZ6 589 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 OR2T4Q8NH00 348 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 RNF128Q8TEB7 428 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 ABHD3Q8WU67 409 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 ZMYND19Q96E35 227 aaPredicted RBP24.46■■□□□ 1.51
CPNE1-203ENST00000397442 SLC25A44Q96H78 314 aaPredicted RBP24.46■■□□□ 1.51
CPNE1-203ENST00000397442 TUBA1CQ9BQE3 449 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 TAS2R16Q9NYV7 291 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 CAMK2AQ9UQM7 478 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 FLVCR1Q9Y5Y0 555 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 FKBP7Q9Y680 259 aa24.46■■□□□ 1.51
CPNE1-203ENST00000397442 FAM171A2A8MVW0 826 aa24.45■■□□□ 1.5
CPNE1-203ENST00000397442 ZNHIT1O43257 154 aa24.45■■□□□ 1.5
CPNE1-203ENST00000397442 GLCEO94923 617 aa24.45■■□□□ 1.5
CPNE1-203ENST00000397442 CTLA4P16410 223 aa24.45■■□□□ 1.5
CPNE1-203ENST00000397442 MAP2K4P45985 399 aa24.45■■□□□ 1.5
CPNE1-203ENST00000397442 NR1H2P55055 460 aa24.45■■□□□ 1.5
CPNE1-203ENST00000397442 LGALS3BPQ08380 585 aa24.45■■□□□ 1.5
CPNE1-203ENST00000397442 CAMK2DQ13557 499 aa24.45■■□□□ 1.5
CPNE1-203ENST00000397442 GGTLC2Q14390 218 aa24.45■■□□□ 1.5
CPNE1-203ENST00000397442 OR51G2Q8NGK0 314 aa24.45■■□□□ 1.5
CPNE1-203ENST00000397442 FNDC9Q8TBE3 224 aa24.45■■□□□ 1.5
CPNE1-203ENST00000397442 NMD3Q96D46 503 aaKnown RBP24.45■■□□□ 1.5
CPNE1-203ENST00000397442 ADAD1Q96M93 576 aaKnown RBP24.45■■□□□ 1.5
CPNE1-203ENST00000397442 ALG12Q9BV10 488 aa24.45■■□□□ 1.5
CPNE1-203ENST00000397442 ADGRL4Q9HBW9 690 aa24.45■■□□□ 1.5
CPNE1-203ENST00000397442 B9D1Q9UPM9 204 aa24.45■■□□□ 1.5
CPNE1-203ENST00000397442 A0A1B0GTH9 108 aa24.44■■□□□ 1.5
CPNE1-203ENST00000397442 AHCYL1O43865 530 aa24.44■■□□□ 1.5
CPNE1-203ENST00000397442 AQP8O94778 261 aa24.44■■□□□ 1.5
CPNE1-203ENST00000397442 FADS2O95864 444 aaKnown RBP24.44■■□□□ 1.5
CPNE1-203ENST00000397442 RASGEF1BQ0VAM2 473 aa24.44■■□□□ 1.5
CPNE1-203ENST00000397442 ZNF324BQ6AW86 544 aaPredicted RBP24.44■■□□□ 1.5
CPNE1-203ENST00000397442 LYPD4Q6UWN0 246 aa24.44■■□□□ 1.5
CPNE1-203ENST00000397442 HDDC2Q7Z4H3 204 aa24.44■■□□□ 1.5
CPNE1-203ENST00000397442 MCTS1Q9ULC4 181 aaKnown RBP24.44■■□□□ 1.5
CPNE1-203ENST00000397442 MOKQ9UQ07 419 aa24.44■■□□□ 1.5
CPNE1-203ENST00000397442 IGLV1-36A0A0B4J1U3 117 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 IRGMA1A4Y4 181 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 ZNF432O94892 652 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 SYNGR4O95473 234 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 RAB36O95755 333 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 DCKP27707 260 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 NTF4P34130 210 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 RPL5P46777 297 aaKnown RBP24.43■■□□□ 1.5
CPNE1-203ENST00000397442 ALDH3B2P48448 385 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 FMODQ06828 376 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 NOXO1Q8NFA2 376 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms