RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 PRG2P13727 222 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 NCF2P19878 526 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-203ENST00000397378 LSP1P33241 339 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 MTNR1AP48039 350 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 ATP4BP51164 291 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 CLNS1AP54105 237 aaKnown RBP7.98□□□□□ -1.13
NEDD9-203ENST00000397378 KLF3P57682 345 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-203ENST00000397378 LCN2P80188 198 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 LARS2Q15031 903 aaKnown RBP7.98□□□□□ -1.13
NEDD9-203ENST00000397378 MAPK11Q15759 364 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 CHI3L2Q15782 390 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 ALKBH6Q3KRA9 238 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 SPANXN4Q5MJ08 99 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 ATG16L1Q676U5 607 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 C6orf89Q6UWU4 347 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 H1FNTQ75WM6 255 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-203ENST00000397378 NET1Q7Z628 596 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-203ENST00000397378 IFT20Q8IY31 132 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 LRRC34Q8IZ02 419 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 CLIP4Q8N3C7 705 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 ADPRHL1Q8NDY3 354 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 ZNF417Q8TAU3 575 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 SYNPRQ8TBG9 265 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 PNPT1Q8TCS8 783 aaKnown RBP7.98□□□□□ -1.13
NEDD9-203ENST00000397378 SNX33Q8WV41 574 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 RAB1CQ92928 201 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 SLC35B4Q969S0 331 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 KTI12Q96EK9 354 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-203ENST00000397378 APOPT1Q96IL0 206 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 ZNF587Q96SQ5 575 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-203ENST00000397378 FOXB1Q99853 325 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 C12orf10Q9HB07 376 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 B3GAT2Q9NPZ5 323 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 SLCO1C1Q9NYB5 712 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 CALML5Q9NZT1 146 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 ZNF443Q9Y2A4 671 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-203ENST00000397378 POFUT2Q9Y2G5 429 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 CHST2Q9Y4C5 530 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 RNF114Q9Y508 228 aa7.98□□□□□ -1.13
NEDD9-203ENST00000397378 E9PBE3 544 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 MS4A18H0YCH9 400 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 HOXA3O43365 443 aaPredicted RBP7.97□□□□□ -1.13
NEDD9-203ENST00000397378 FOXH1O75593 365 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 CLPTM1O96005 669 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 CSF1P09603 554 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 B4GALT1P15291 398 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 GRPRP30550 384 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 S100A3P33764 101 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 AQP5P55064 265 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 CAMK2DQ13557 499 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 DOC2BQ14184 412 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 RAB39AQ14964 217 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 MOGQ16653 247 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 HFEQ30201 348 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 MS4A18Q3C1V0 323 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 KLF17Q5JT82 389 aaPredicted RBP7.97□□□□□ -1.13
NEDD9-203ENST00000397378 FAM209AQ5JX71 171 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 COX20Q5RI15 118 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 NHLRC1Q6VVB1 395 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 USP51Q70EK9 711 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 PIWIL3Q7Z3Z3 882 aaKnown RBP7.97□□□□□ -1.13
NEDD9-203ENST00000397378 SERPINA11Q86U17 422 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 JAZF1Q86VZ6 243 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 ZNF584Q8IVC4 421 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 UEVLDQ8IX04 471 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 DEFB108BQ8NET1 73 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 ZNF519Q8TB69 540 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 SLC38A4Q969I6 547 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 TAAR8Q969N4 342 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 TSPAN32Q96QS1 320 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 PANX1Q96RD7 426 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 GAL3ST1Q99999 423 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 SLC30A2Q9BRI3 323 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 SPATA9Q9BWV2 254 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 ARMC7Q9H6L4 198 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 AKTIPQ9H8T0 292 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 DECR2Q9NUI1 292 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 C1RLQ9NZP8 487 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 P2RX2Q9UBL9 471 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 LEF1Q9UJU2 399 aaPredicted RBP7.97□□□□□ -1.13
NEDD9-203ENST00000397378 ZNF232Q9UNY5 417 aa7.97□□□□□ -1.13
NEDD9-203ENST00000397378 POLR3KQ9Y2Y1 108 aaPredicted RBP7.97□□□□□ -1.13
NEDD9-203ENST00000397378 TENM3Q9P273 2699 aa7.96□□□□□ -1.13
NEDD9-203ENST00000397378 PLXNB1O43157 2135 aa7.96□□□□□ -1.13
NEDD9-203ENST00000397378 SMIM23A6NLE4 172 aa7.96□□□□□ -1.14
NEDD9-203ENST00000397378 PIP5K1CO60331 668 aa7.96□□□□□ -1.14
NEDD9-203ENST00000397378 ENTPD5O75356 428 aa7.96□□□□□ -1.14
NEDD9-203ENST00000397378 SNAP29O95721 258 aa7.96□□□□□ -1.14
NEDD9-203ENST00000397378 MT-ND5P03915 603 aa7.96□□□□□ -1.14
NEDD9-203ENST00000397378 HLA-DOBP13765 273 aa7.96□□□□□ -1.14
NEDD9-203ENST00000397378 CDKN2CP42773 168 aa7.96□□□□□ -1.14
NEDD9-203ENST00000397378 CRISP3P54108 245 aa7.96□□□□□ -1.14
NEDD9-203ENST00000397378 RELBQ01201 579 aa7.96□□□□□ -1.14
NEDD9-203ENST00000397378 LRRC74AQ0VAA2 488 aa7.96□□□□□ -1.14
NEDD9-203ENST00000397378 PDCD1Q15116 288 aa7.96□□□□□ -1.14
NEDD9-203ENST00000397378 CARD17Q5XLA6 110 aa7.96□□□□□ -1.14
NEDD9-203ENST00000397378 FIP1L1Q6UN15 594 aaKnown RBP7.96□□□□□ -1.14
NEDD9-203ENST00000397378 SKA3Q8IX90 412 aa7.96□□□□□ -1.14
NEDD9-203ENST00000397378 SCAIQ8N9R8 606 aa7.96□□□□□ -1.14
NEDD9-203ENST00000397378 GLB1L3Q8NCI6 653 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms