RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 RAB33BQ9H082 229 aa21.54■■□□□ 1.04
PABPN1-202ENST00000397276 WDR76Q9H967 626 aa21.54■■□□□ 1.04
PABPN1-202ENST00000397276 CTSFQ9UBX1 484 aa21.54■■□□□ 1.04
PABPN1-202ENST00000397276 TCRBV16S1A1N1A0A5B0 115 aa21.54■■□□□ 1.04
PABPN1-202ENST00000397276 GPR171O14626 319 aa21.54■■□□□ 1.04
PABPN1-202ENST00000397276 DUX1O43812 170 aa21.54■■□□□ 1.04
PABPN1-202ENST00000397276 SOX2P48431 317 aa21.54■■□□□ 1.04
PABPN1-202ENST00000397276 OR5M10Q6IEU7 315 aa21.54■■□□□ 1.04
PABPN1-202ENST00000397276 OR6N2Q8NGY6 317 aa21.54■■□□□ 1.04
PABPN1-202ENST00000397276 NUDT22Q9BRQ3 303 aa21.54■■□□□ 1.04
PABPN1-202ENST00000397276 VN1R1Q9GZP7 353 aa21.54■■□□□ 1.04
PABPN1-202ENST00000397276 EXOSC3Q9NQT5 275 aaKnown RBP21.54■■□□□ 1.04
PABPN1-202ENST00000397276 MRPL15Q9P015 296 aaKnown RBP21.54■■□□□ 1.04
PABPN1-202ENST00000397276 IKZF2Q9UKS7 526 aa21.54■■□□□ 1.04
PABPN1-202ENST00000397276 CACNA1CQ13936 2221 aa21.54■■□□□ 1.04
PABPN1-202ENST00000397276 HPXP02790 462 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 ATF4P18848 351 aaPredicted RBP21.53■■□□□ 1.04
PABPN1-202ENST00000397276 DNASE1P24855 282 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 ISXQ2M1V0 245 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 LIPNQ5VXI9 398 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 RGP1Q92546 391 aaPredicted RBP21.53■■□□□ 1.04
PABPN1-202ENST00000397276 DMDP11532 3685 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 EPHA4P54764 986 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 GRK1Q15835 563 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 DPY19L4Q7Z388 723 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 LUZP2Q86TE4 346 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 SERPINA12Q8IW75 414 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 TOMM5Q8N4H5 51 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 THAP3Q8WTV1 239 aaPredicted RBP21.53■■□□□ 1.04
PABPN1-202ENST00000397276 GIMAP1Q8WWP7 306 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 GCDHQ92947 438 aaPredicted RBP21.53■■□□□ 1.04
PABPN1-202ENST00000397276 WWTR1Q9GZV5 400 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 LAT2Q9GZY6 243 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 COPS7AQ9UBW8 275 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 ZNF281Q9Y2X9 895 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 C2orf72A6NCS6 295 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 GATBO75879 557 aaKnown RBP21.53■■□□□ 1.04
PABPN1-202ENST00000397276 ZP1P60852 638 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 CHMP1BQ7LBR1 199 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 PM20D2Q8IYS1 436 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 DAZLQ92904 295 aaKnown RBP21.53■■□□□ 1.04
PABPN1-202ENST00000397276 MRPL48Q96GC5 212 aaKnown RBP21.53■■□□□ 1.04
PABPN1-202ENST00000397276 CHRNA10Q9GZZ6 450 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 ADAM19Q9H013 955 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 DLL4Q9NR61 685 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 FGF21Q9NSA1 209 aa21.53■■□□□ 1.04
PABPN1-202ENST00000397276 PPIEQ9UNP9 301 aaKnown RBP21.53■■□□□ 1.04
PABPN1-202ENST00000397276 EML5Q05BV3 1969 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 ZNF879B4DU55 563 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 TSPAN4O14817 238 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 ABCD3P28288 659 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 CENPAP49450 140 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 SELENOPP49908 381 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 PUDPQ08623 228 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 IL10RAQ13651 578 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 COL28A1Q2UY09 1125 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 CD276Q5ZPR3 534 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 CHRDL2Q6WN34 429 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 SLC16A9Q7RTY1 509 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 KANSL1Q7Z3B3 1105 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 IQCF2Q8IXL9 164 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 THEM6Q8WUY1 208 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 YIPF5Q969M3 257 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 RNF166Q96A37 237 aaPredicted RBP21.52■■□□□ 1.04
PABPN1-202ENST00000397276 GFI1Q99684 422 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 MRM2Q9UI43 246 aaKnown RBP21.52■■□□□ 1.04
PABPN1-202ENST00000397276 FLVCR2Q9UPI3 526 aa21.52■■□□□ 1.04
PABPN1-202ENST00000397276 MRPS17Q9Y2R5 130 aaKnown RBP21.52■■□□□ 1.04
PABPN1-202ENST00000397276 TRIM77I1YAP6 450 aa21.52■■□□□ 1.03
PABPN1-202ENST00000397276 NUDT21O43809 227 aaKnown RBP21.52■■□□□ 1.03
PABPN1-202ENST00000397276 GSG1Q2KHT4 349 aa21.52■■□□□ 1.03
PABPN1-202ENST00000397276 EXD3Q8N9H8 876 aa21.52■■□□□ 1.03
PABPN1-202ENST00000397276 MVB12AQ96EY5 273 aa21.52■■□□□ 1.03
PABPN1-202ENST00000397276 ABRACLQ9P1F3 81 aa21.52■■□□□ 1.03
PABPN1-202ENST00000397276 LAMP5Q9UJQ1 280 aa21.52■■□□□ 1.03
PABPN1-202ENST00000397276 CDC40O60508 579 aaKnown RBP eCLIP21.51■■□□□ 1.032e-6■□□□□ 11
PABPN1-202ENST00000397276 AKR7A3O95154 331 aa21.51■■□□□ 1.03
PABPN1-202ENST00000397276 SLC29A4Q7RTT9 530 aa21.51■■□□□ 1.03
PABPN1-202ENST00000397276 FAM220AQ7Z4H9 259 aa21.51■■□□□ 1.03
PABPN1-202ENST00000397276 D2HGDHQ8N465 521 aa21.51■■□□□ 1.03
PABPN1-202ENST00000397276 LIPHQ8WWY8 451 aa21.51■■□□□ 1.03
PABPN1-202ENST00000397276 SLC7A5P2Q9GIP4 190 aa21.51■■□□□ 1.03
PABPN1-202ENST00000397276 G3V3Q6 166 aa21.51■■□□□ 1.03
PABPN1-202ENST00000397276 BCAT2O15382 392 aaPredicted RBP21.51■■□□□ 1.03
PABPN1-202ENST00000397276 SSNA1O43805 119 aa21.51■■□□□ 1.03
PABPN1-202ENST00000397276 SLC25A12O75746 678 aa21.51■■□□□ 1.03
PABPN1-202ENST00000397276 TAGLNQ01995 201 aaKnown RBP21.51■■□□□ 1.03
PABPN1-202ENST00000397276 OVCH1Q7RTY7 1134 aa21.51■■□□□ 1.03
PABPN1-202ENST00000397276 CCNL2Q96S94 520 aaPredicted RBP21.51■■□□□ 1.03
PABPN1-202ENST00000397276 CLEC4MQ9H2X3 399 aaPredicted RBP21.51■■□□□ 1.03
PABPN1-202ENST00000397276 C12orf4Q9NQ89 552 aa21.51■■□□□ 1.03
PABPN1-202ENST00000397276 MRPL39Q9NYK5 338 aaKnown RBP21.51■■□□□ 1.03
PABPN1-202ENST00000397276 FRRS1LQ9P0K9 344 aa21.51■■□□□ 1.03
PABPN1-202ENST00000397276 ATXN7L1Q9ULK2 861 aaPredicted RBP21.51■■□□□ 1.03
PABPN1-202ENST00000397276 NUBP2Q9Y5Y2 271 aa21.51■■□□□ 1.03
PABPN1-202ENST00000397276 HLA-DQA2P01906 255 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 ZNF684Q5T5D7 378 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 CMTM4Q8IZR5 234 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 OR2T35Q8NGX2 323 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 AUNIPQ9H7T9 357 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms