RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 TMEM123Q8N131 208 aa12.51□□□□□ -0.41
GAPDH-203ENST00000396858 FAM26EQ8N5C1 309 aa12.51□□□□□ -0.41
GAPDH-203ENST00000396858 OR6X1Q8NH79 312 aa12.51□□□□□ -0.41
GAPDH-203ENST00000396858 TRUB1Q8WWH5 349 aaKnown RBP12.51□□□□□ -0.41
GAPDH-203ENST00000396858 TSSK2Q96PF2 358 aa12.51□□□□□ -0.41
GAPDH-203ENST00000396858 KCNK17Q96T54 332 aa12.51□□□□□ -0.41
GAPDH-203ENST00000396858 RNF122Q9H9V4 155 aa12.51□□□□□ -0.41
GAPDH-203ENST00000396858 CALHM2Q9HA72 323 aa12.51□□□□□ -0.41
GAPDH-203ENST00000396858 CLN6Q9NWW5 311 aa12.51□□□□□ -0.41
GAPDH-203ENST00000396858 TINAGQ9UJW2 476 aa12.51□□□□□ -0.41
GAPDH-203ENST00000396858 RCE1Q9Y256 329 aa12.51□□□□□ -0.41
GAPDH-203ENST00000396858 SVILO95425 2214 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 SLC22A23A1A5C7 686 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 AHRRA9YTQ3 701 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 APOL3O95236 402 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 GABRA1P14867 456 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 SPI1P17947 270 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 SLC2A5P22732 501 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 EDNRAP25101 427 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 PYCR1P32322 319 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 RPS7P62081 194 aaKnown RBP12.5□□□□□ -0.41
GAPDH-203ENST00000396858 SIRPAP78324 504 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 TEKQ02763 1124 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 APOFQ13790 326 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 OCLNQ16625 522 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 C6orf141Q5SZD1 244 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 NXNL2Q5VZ03 156 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 NSUN5P2Q63ZY6 315 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 RTL6Q6ICC9 239 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 AAED1Q7RTV5 226 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 GID4Q8IVV7 300 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 BPIFB6Q8NFQ5 453 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 OR51L1Q8NGJ5 315 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 KISS1RQ969F8 398 aaPredicted RBP12.5□□□□□ -0.41
GAPDH-203ENST00000396858 ZNF566Q969W8 418 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 TMEM45BQ96B21 275 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 SLC25A44Q96H78 314 aaPredicted RBP12.5□□□□□ -0.41
GAPDH-203ENST00000396858 ADAD1Q96M93 576 aaKnown RBP12.5□□□□□ -0.41
GAPDH-203ENST00000396858 ALKBH3Q96Q83 286 aaPredicted RBP12.5□□□□□ -0.41
GAPDH-203ENST00000396858 SNX18Q96RF0 628 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 DDOQ99489 341 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 ALG12Q9BV10 488 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 NMNAT2Q9BZQ4 307 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 OR51V1Q9H2C8 321 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 RERGLQ9H628 205 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 BCO1Q9HAY6 547 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 AMBNQ9NP70 447 aa12.5□□□□□ -0.41
GAPDH-203ENST00000396858 VSX1Q9NZR4 365 aaPredicted RBP12.5□□□□□ -0.41
GAPDH-203ENST00000396858 NOSIPQ9Y314 301 aaKnown RBP12.5□□□□□ -0.41
GAPDH-203ENST00000396858 PRRC2CQ9Y520 2896 aaKnown RBP12.5□□□□□ -0.41
GAPDH-203ENST00000396858 IGKV1D-43A0A0B4J1Z2 117 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 CD8B2A6NJW9 211 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 EIF4E1BA6NMX2 242 aaKnown RBP12.49□□□□□ -0.41
GAPDH-203ENST00000396858 ZNF726A6NNF4 738 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 ZNF724A8MTY0 619 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 FAM171A2A8MVW0 826 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 DCTN6O00399 190 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 GPR171O14626 319 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 PRRG2O14669 202 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 PRODHO43272 600 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 SS18L1O75177 396 aaPredicted RBP12.49□□□□□ -0.41
GAPDH-203ENST00000396858 ZNF432O94892 652 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 DBTP11182 482 aaKnown RBP12.49□□□□□ -0.41
GAPDH-203ENST00000396858 CTLA4P16410 223 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 NTF4P34130 210 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 CSNK1A1P48729 337 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 CHN2P52757 468 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 SLC25A1P53007 311 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 RBPJQ06330 500 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 LYPD4Q6UWN0 246 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 B3GLCTQ6Y288 498 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 SEM1Q6ZVN7 128 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 NUFIP2Q7Z417 695 aaKnown RBP12.49□□□□□ -0.41
GAPDH-203ENST00000396858 PROKR2Q8NFJ6 384 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 OR6K6Q8NGW6 343 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 OR6N1Q8NGY5 312 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 ZNRF4Q8WWF5 429 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 SGCDQ92629 289 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 WNT2BQ93097 391 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 FOXN4Q96NZ1 517 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 NUAK2Q9H093 628 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 TP63Q9H3D4 680 aaPredicted RBP12.49□□□□□ -0.41
GAPDH-203ENST00000396858 ASB6Q9NWX5 421 aa12.49□□□□□ -0.41
GAPDH-203ENST00000396858 CACNA1BQ00975 2339 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 IGLV1-36A0A0B4J1U3 117 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 MBD3L4A6NDZ8 208 aaPredicted RBP12.48□□□□□ -0.41
GAPDH-203ENST00000396858 MBD3L3A6NE82 208 aaPredicted RBP12.48□□□□□ -0.41
GAPDH-203ENST00000396858 MBD3L5A6NJ08 208 aaPredicted RBP12.48□□□□□ -0.41
GAPDH-203ENST00000396858 M0R3G1 203 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 SLC16A7O60669 478 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 SLC43A1O75387 559 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 GPANK1O95872 356 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 IGHV3-9P01782 118 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 GSTT1P30711 240 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 HTR1FP30939 366 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 PTGER4P35408 488 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 PHYHD1Q5SRE7 291 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 SLC25A30Q5SVS4 291 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 MEDAGQ5VYS4 303 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 AHSA2Q719I0 299 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms