RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 BOLA1Q9Y3E2 137 aa9.49□□□□□ -0.89
LIMCH1-203ENST00000396595 PRRC2BQ5JSZ5 2229 aaKnown RBP9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 A0A1B0GWA3 101 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 I6L893 689 aaPredicted RBP9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 NME2P22392 152 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 ALKBH1Q13686 389 aaKnown RBP9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 TMEM201Q5SNT2 666 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 OPN5Q6U736 354 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 CADM3Q8N126 398 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 TM4SF18Q96CE8 201 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 PCED1AQ9H1Q7 454 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 MUTYHQ9UIF7 546 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 URGCP-MRPS24S4R325 110 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 NUDT19A8MXV4 375 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 HLA-DOBP13765 273 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 CD300LGQ6UXG3 332 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 TAS1R1Q7RTX1 841 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 MISPQ8IVT2 679 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 OR14A16Q8NHC5 309 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 PSMF1Q92530 271 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 TSSK2Q96PF2 358 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 PDCD1LG2Q9BQ51 273 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 GLIPR2Q9H4G4 154 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 RGPD8O14715 1765 aaPredicted RBP9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 PRAMEF27A3QJZ7 478 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 LRIT2A6NDA9 550 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 GFRA2O00451 464 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 DDAH2O95865 285 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 HLA-HP01893 362 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 TACR3P29371 465 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 ZNF239Q16600 458 aaKnown RBP9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 SLC35D3Q5M8T2 416 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 PRAMEF9Q5VWM5 478 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 FAM71E1Q6IPT2 247 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 DLEU7Q6UYE1 221 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 VASH1Q7L8A9 365 aaPredicted RBP9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 PIGCQ92535 297 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 C20orf85Q9H1P6 137 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 MRPS28Q9Y2Q9 187 aaKnown RBP9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 PHLPP1O60346 1717 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 HMX2A2RU54 273 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 PPP5D1E7EU14 171 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 TAPBPO15533 448 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 ZNF780AO75290 641 aaPredicted RBP9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 C1QBP02746 253 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 MT-ND4LP03901 98 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 NAGAP17050 411 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 IL2RGP31785 369 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 TEKQ02763 1124 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 PDLIM3Q53GG5 364 aaPredicted RBP9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 SLC35D2Q76EJ3 337 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 GDF7Q7Z4P5 450 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 RDH10Q8IZV5 341 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 SLC22A24Q8N4F4 322 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 NANOGP1Q8N7R0 232 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 C15orf54Q8N8G6 183 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 OR6M1Q8NGM8 313 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 BCL7CQ8WUZ0 217 aaPredicted RBP9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 DUS3LQ96G46 650 aaKnown RBP9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 ZIC5Q96T25 663 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 PKMYT1Q99640 499 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 RYDENQ9NUL5 291 aaKnown RBP9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 STEAP1Q9UHE8 339 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 CA14Q9ULX7 337 aa9.48□□□□□ -0.89
LIMCH1-203ENST00000396595 SUSD5O60279 629 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 TIMP1P01033 207 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 CD14P08571 375 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 POU3F2P20265 443 aaPredicted RBP9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 NFYBP25208 207 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 CATR1Q13166 79 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 ASAH1Q13510 395 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 ADIRFQ15847 76 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 DEFB133Q30KQ1 61 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 LPCAT3Q6P1A2 487 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 NKAIN3Q8N8D7 197 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 UBQLN3Q9H347 655 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 HIF1ANQ9NWT6 349 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 IGLV3-10A0A075B6K4 115 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 TRAV36DV7A0A075B6V5 113 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 OR7C1O76099 320 aaPredicted RBP9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 SLCO2B1O94956 709 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 LPLP06858 475 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 TSFMP43897 325 aaKnown RBP9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 LCN6P62502 163 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 SLC25A46Q96AG3 418 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 TEX37Q96LM6 180 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 NMNAT3Q96T66 252 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 ARHGAP9Q9BRR9 750 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 C20orf24Q9BUV8 137 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 VAMP8Q9BV40 100 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 SRRQ9GZT4 340 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 PRSS16Q9NQE7 514 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 DCAF16Q9NXF7 216 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 HAO2Q9NYQ3 351 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 CNTRLQ7Z7A1 2325 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 TRBV11-1A0A0K0K1C0 115 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 TRAF3IP2O43734 574 aaPredicted RBP9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 OR1D4P47884 311 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 C19orf35Q6ZS72 473 aa9.47□□□□□ -0.89
LIMCH1-203ENST00000396595 ZNF740Q8NDX6 193 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms